Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2521 |
Symbol | |
ID | 5670917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3000770 |
End bp | 3002263 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641241438 |
Product | major facilitator transporter |
Protein accession | YP_001506859 |
Protein GI | 158314351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCG AAGACTCCGG ACGCGTCGAC GCGCGGAAGA CGGATGCAGG GCCGCGGCGC TGGTGGATCC TGGGAGCTCT CTGCCTCGGT CTGGTCGTCG TCGAGGTCGA CGCGAGCATT CTCAACGTCG CGATCCCGTC CATCGCGGCT GACCTTGACG CCGATCCGGC CGACATGGCG TGGATCGTCG ACTCCTTCGT CCTCTCCTTC GCAAGCTTCA TGCTCGTCGC CGGACGCCTG GGTGACCGTT TTGGGCACAG GAAGATACTC GAGGCGGGAC TCCTGCTGTT CTCCCTGGCC TCCTTCGCCG CCACCTTCGC GGACTCACCC GCGGGCCTGG TCGCATGTCG CGCGGTCCTC GGTATCGGCG CCGCGGCTAT CCTGCCGACA TCGAGAGCGC TGGTCATGGC GGCGTTCCCC TCCGCCGAGC ACCCCAGAGC CCTGGGGTAC TGGACCGCGG CAATAGGAGT GAGCTTACCG CTGGGACCTT TGCTCGGCGG GCTGCTCCTC GACCATTTCT GGTGGGGTTC CGTCTTCCTC GTGGGCGGGC CCACCTCGCT GCTGGCCGGT GTCATCAACG CGGTGGTGCT CGGGCGTCAG AGGGCTGGTG GGGGCAAAGG CGGATGGGAT CCGCCTGGGA TTGTCCTGTC CGCGTTCGGA ACAGCAGCAT TGATATTCGG CATCATCGAG GGCCCTCGCC TGGGGTGGCT CTCCGCCACG ATTCTGGCAT GCCATGGCTC CGCCCTGGTG GCACTGGCCG CCTTCTTCGT CTGGGAACGT CATGCGACGC ACCCGGTGGT CGAACCGGAA CTGCTGCGAG TGCGATCGTT CACCGTGGGC TCGATGGTCG CCGCACTCTC GCTGTTCGTG TTCAACGGGC TCCTCTTCGT GCTCACCCAG TATCTCCAGA TCCTCGAGGG ATACAGCCCT CTCCAGTCCG GTCTCCGAGT GATCCCGCTG GGAGCGGGAT TCATGCTTGG CAGCGTCTTG TCACGCCGTG CGGCCCTGCG AATCGGTCAA CGTGGAACGC TGGCCATCGG GTTCGCGGCG GTGGGATCGG CCCTCCTGGT ACTCCTGCTC GGTACCTGGT CCGACGGTTA TCTCGTCACG GGTGTCGGTG TTCTGATCGT CGGCTGGGGA ACCGGGCTGA CAATGGCCTG CGCCGTCCAT CTGGCACTGA GCGAGGTTCC GGCGTCCACA GCGGGCGCCG CCGGAGCCTT CAGTAACTCG GTAAGGCAGT TGGGGGCGGC ACTCGGCGTC GCAGTCCTCG GCGCCGCACT CGGGACTTCC GCAGGTAGAA GTGGCGCGCA GAACCCTTCT TCCTCTGATC CTGTCAGCAA TACCGCTGGA AGCGTCGTGG CGGACATTGC GACCGCTCGT CCGGGCCTTG GCATGGAAAA CGGGTTCAGG CTCGCCTTCG CCCTGGCGGC GATCGTGAGT TGCCTGTGCA TCGTGCTTGT CGCCGTGGCT TTCAGGAAAG TTCGATCAGC CTGA
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Protein sequence | MEREDSGRVD ARKTDAGPRR WWILGALCLG LVVVEVDASI LNVAIPSIAA DLDADPADMA WIVDSFVLSF ASFMLVAGRL GDRFGHRKIL EAGLLLFSLA SFAATFADSP AGLVACRAVL GIGAAAILPT SRALVMAAFP SAEHPRALGY WTAAIGVSLP LGPLLGGLLL DHFWWGSVFL VGGPTSLLAG VINAVVLGRQ RAGGGKGGWD PPGIVLSAFG TAALIFGIIE GPRLGWLSAT ILACHGSALV ALAAFFVWER HATHPVVEPE LLRVRSFTVG SMVAALSLFV FNGLLFVLTQ YLQILEGYSP LQSGLRVIPL GAGFMLGSVL SRRAALRIGQ RGTLAIGFAA VGSALLVLLL GTWSDGYLVT GVGVLIVGWG TGLTMACAVH LALSEVPAST AGAAGAFSNS VRQLGAALGV AVLGAALGTS AGRSGAQNPS SSDPVSNTAG SVVADIATAR PGLGMENGFR LAFALAAIVS CLCIVLVAVA FRKVRSA
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