Gene Franean1_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2487 
Symbol 
ID5670883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2965425 
End bp2965937 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content72% 
IMG OID641241404 
Producthydrogenase maturation protease 
Protein accessionYP_001506825 
Protein GI158314317 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC TGGTGGCCGG CGTCGGCAAC ATACTGCTCG GCGACGACGG CTTCGGCGTG 
CAGGTCGCCC GCCACCTGCG GCGCACCGGC CCGCCGCCGC GGGTGACCAT CGCCGACTAC
GGGACCAGCG GGCTGCACCT GGCCTTCGAC CTGTGCTCCG GCGGTTATTC GACGGTGGTG
CTCGTCGACG CGCTCGGACG CGGGTACGAA CCAGGCACGG TGTCCCTCGT GGACCTGACC
GACGTGCGGG CGCCATCCGA GGTCGACGCG CACGGGATGC GTCCGGACGT CGTCCTCGAC
CTGGTCGACA CGCTCGGAGG GCATCTCGAC CGGGTGCTGC TGGTCGGCTG CGAGCCGGCC
TCGGTGGATC ACCAGGTCGG GCTCTCGCCA CCGGTCGCGG CCGCCGTCGA GCCGGCGGCG
CGCCTCGTCC GGTCGGTCAT CTCCGGCCAG TCCGGGATCA ACGGCGCGCC CGGGATCACA
GTCAGGCGGA TCGAGACCCA ACGAGAGGAA TGA
 
Protein sequence
MSTLVAGVGN ILLGDDGFGV QVARHLRRTG PPPRVTIADY GTSGLHLAFD LCSGGYSTVV 
LVDALGRGYE PGTVSLVDLT DVRAPSEVDA HGMRPDVVLD LVDTLGGHLD RVLLVGCEPA
SVDHQVGLSP PVAAAVEPAA RLVRSVISGQ SGINGAPGIT VRRIETQREE