Gene Franean1_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2486 
Symbol 
ID5670882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2965040 
End bp2965312 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content70% 
IMG OID641241403 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001506824 
Protein GI158314316 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCTCG GTATTCCGGG TGAGGTCGTG GAGATCCGGC CAGACCGCCC GGACATCGCG 
ACGGTGGACG TCAGCGGGGT GCGGCGGGCG ATCAACATCG GATTGCTCGA CGAGCACCCG
CCACGCCCAG GGGACTGGGT CCTCATCCAC GTCGGGTTCG CGCTGTCCCT GATCGACGAG
GCCGAGGCGC GGGCGGCGCT GGACTTCCTC ACCGGCATCG GGCGTGCCTA CGACGACGAG
CTGGCCGCGC TGCGCGCCTC GTCCATCGAC TAG
 
Protein sequence
MCLGIPGEVV EIRPDRPDIA TVDVSGVRRA INIGLLDEHP PRPGDWVLIH VGFALSLIDE 
AEARAALDFL TGIGRAYDDE LAALRASSID