Gene Franean1_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2483 
Symbol 
ID5670879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2962396 
End bp2962728 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content75% 
IMG OID641241400 
Producthydrogenase expression/synthesis HypA 
Protein accessionYP_001506821 
Protein GI158314313 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGAGC TCTCGGTCAC CGTCGAGCTG GTCGACATGG TCGCCCGGCG GGTCCCGGCG 
GACGTCCAGG TGACCCGGGT GGCGCTCGAG GTCGGGCGGT TGTCCGGGGT GATGACCTCG
CCGCTGCGCT TCTGCTTCGA CCTGGTCGCC GCCGGGACGT CGCTCGACGG CGCCCGGCTC
GACATCGCCG AGCCGCCGGG GCGGGGCCGC TGCCGCCGGT GCGGGGCCGA CGTCGACCTG
CCGGACCTGC TCACGCCGTG TGGCTGCGGG AGCCACGAGA TCGAGCTGAC CGGCGGTGAG
GAGGTCCGGA TCACCGCCGT CGAGGTGCGC TGA
 
Protein sequence
MHELSVTVEL VDMVARRVPA DVQVTRVALE VGRLSGVMTS PLRFCFDLVA AGTSLDGARL 
DIAEPPGRGR CRRCGADVDL PDLLTPCGCG SHEIELTGGE EVRITAVEVR