Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2471 |
Symbol | |
ID | 5670867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2947339 |
End bp | 2949498 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241388 |
Product | copper resistance D domain-containing protein |
Protein accession | YP_001506809 |
Protein GI | 158314301 |
COG category | [P] Inorganic ion transport and metabolism [S] Function unknown |
COG ID | [COG1276] Putative copper export protein [COG3336] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.812246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTC CCGTTGTCGC GCTCGCCGCG CTGCTGGCGC TGGTGGCACT CCTGGCCGTC GTCGCCACCG GCCCCGCGGG GGTGGCCCTT CCGGGGCTGC CCGACGCCGG TTCGCTCACC CACTGGGGGC TGCCGGTCGC CCGGATGGTC AGCGAGGTGG CCGCTGTCGG GACGGTCGGC TGGCTGCTCG CCGCCGCCGT GCTCATCCCG GCCCAGCAGG GCCGGCTCGG CGCGGCGGCA CGCCGCCACG GGCGGGCCGC CGCCGCCTCG GCGGCGGTGT GGGCGGTCGC GGCGCTCGCC GAGCTGGTGT TCACCGCGTC CGACATCACC GCCCGCCCCC CCGGCGACGT CCTGGACCCG GCGGCGCTGC GCTCCTTCGT CTCCGCCGCC CCACAGGGCC GGGCGCTGCT CATCGTGGCC GTCGCGGCGC TGGTCGTCGC CCTGGTGAGC GCGACACTGA TGTCGACCGT GGCCGCCGGA TGGCTGCTCG CGCTCGCCTG CGCGGCGCTG CTCCCGCCGG TGGTCACCGG GCACGCGGCC GGGTCGTCCC AGCACGCGCT CGCCGTCATC GCGCTCGGCC TGCACATCAC GGCGGCCGTG GTCTGGATGG GCGGCCTGCT GGCCCTGCTG ACCATGCGGG CCCTGCCGGA CACCACCTTC TTCGCCGCGT TGCGCCGCTA CTCGCGGCTG GCGGCCTGGG CCGCGGGGGC CACCGCGGTC GGAGGCGTGG CCAGCGCCGC CGTCCGGCTC GGCGGGTTCG GCCCGCTGTT CGACGACCGG TACGGCCTGC TGGTGCTCGG CAAGGCCGCC GGCCTCCTCA CCGCCGTCAC ACTCGGCGGC CTCGTGCGCC GCCGGGTGAT CACCGCTGCC GCGGCCGGCG ACCGCGCCGA CGCGAGCGCC GTCCGAGCGG ACTCCGAGCC CGCGGACACC GTCGACGCGG CCACGGCAGG CGCAGGCACG GCGAATGCGG CCGCCGGCGG CGTACCCACC CGCCTGAGCG CGTTCCGGCG GCTCGCCGCG GTCGAGATCT GCGTCCTCGC GGCGACGTTC GGACTGGCAG CGGGCCTGGC GCAGACGGCG CCGCCGGTCA ACGACTCGGC ACTGCCGACC GACCCGACCG AGGGCCTGCT CGGCTACCCG ATGCCACCGC CGATCACACC TGGACGGCTC CTCACCTCCT GGCATCCCGA CTGGGTGTTC CTCGGCCTGG TCGCCCTCGC CGCCGGCCTG TACCTGACCG GGGTAATCCG GCTCGCGCGC CGCGGCGACA GCTGGCCGAT CGGCCGCACG ATCGGGTTCC TGACCGGACT CGCGCTGGTC GCTGTCGTGA CGTCCGGCGG CCTCGGCACC TACGGGCCGG TGCTGCTCAG CGTGCACATG ACCCAGCACA TGATCCTCAC GATGCTGGCG CCGATCCCGC TGGTGCTCGG CGCACCGATC ACCCTCGCGC TGCGCGCGCT GCGGCCGGCG TCCGCGCCGT ACCGCGCCGG GCCGCGCGAG TGGCTGCTCG CCGGGCTGCA CTCCTGGCCC GCGCGGGTGG TGACCCATCC GCTGTTCGTC ACCGCGAACT TCGCCGGCAG CCTGTACGTG CTGTACCTGA GCGACCTGCT CGGCTACCTG ATGAACAGCC ACCTCGGCCA CCTGGCGATG AACGCCCACT TCCTGATGAC GGGCTTCTAC TTCTTCGAGG TCCTCATCGG CATCGACCCG CTGCCGAAGC GGCCACCGCA CCCCGGGCGG GTGCTGATGC TGATGGCGGT GGTCCCGTTC CACGCCTTCC TCGGGCTCAC GATCATGAGC ACGTCCACGG TGCTGGGCAG CAGCTGGTAC GAGCAGCTCG TCCGCCCCTG GGGGGTCAGC CCGCTGCACG ATCAGGGCAC AGCCGGGGGC ATCACCTGGT CGTTCGGGGA GGTCCCGACC CTGGTGGTGC TGCTCGTCCT CGCCGTGCAG TGGGCCCGCA CCGACGAGCG CCGCGCCCGC ACCCGCGAGC GCCGCGTCGA CGCCGCCGGG GTGGACGAAC AGCTCGACGC CTACAACGCC TACCTCGCCC GCCTCAACGG CGGACGGCCC GCGCCGGCGA AACAGGCCGC ACCGACCGTC CCGCCGGTAC CGGCCCAGCG CGGCGACACC GGCTCCCCCA CCACCGGACC GGGCTCCTGA
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Protein sequence | MAVPVVALAA LLALVALLAV VATGPAGVAL PGLPDAGSLT HWGLPVARMV SEVAAVGTVG WLLAAAVLIP AQQGRLGAAA RRHGRAAAAS AAVWAVAALA ELVFTASDIT ARPPGDVLDP AALRSFVSAA PQGRALLIVA VAALVVALVS ATLMSTVAAG WLLALACAAL LPPVVTGHAA GSSQHALAVI ALGLHITAAV VWMGGLLALL TMRALPDTTF FAALRRYSRL AAWAAGATAV GGVASAAVRL GGFGPLFDDR YGLLVLGKAA GLLTAVTLGG LVRRRVITAA AAGDRADASA VRADSEPADT VDAATAGAGT ANAAAGGVPT RLSAFRRLAA VEICVLAATF GLAAGLAQTA PPVNDSALPT DPTEGLLGYP MPPPITPGRL LTSWHPDWVF LGLVALAAGL YLTGVIRLAR RGDSWPIGRT IGFLTGLALV AVVTSGGLGT YGPVLLSVHM TQHMILTMLA PIPLVLGAPI TLALRALRPA SAPYRAGPRE WLLAGLHSWP ARVVTHPLFV TANFAGSLYV LYLSDLLGYL MNSHLGHLAM NAHFLMTGFY FFEVLIGIDP LPKRPPHPGR VLMLMAVVPF HAFLGLTIMS TSTVLGSSWY EQLVRPWGVS PLHDQGTAGG ITWSFGEVPT LVVLLVLAVQ WARTDERRAR TRERRVDAAG VDEQLDAYNA YLARLNGGRP APAKQAAPTV PPVPAQRGDT GSPTTGPGS
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