Gene Franean1_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2460 
Symbol 
ID5670856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2928083 
End bp2929060 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content79% 
IMG OID641241377 
ProductFHA domain-containing protein 
Protein accessionYP_001506798 
Protein GI158314290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0199195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.586989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGG AAACCGGCCC GGCCGACGGT GACGAGGACA GCCCGCACAG CGAGGGCGAG 
GACGAGCCGG CCTACCGCCC GCCGACCGGA TGGCTGGCCG GCCCCGGCCC GGGGCGGGCC
TATCCCACCC CTGAGCCGTC CGGGGCAACC ACCCAGCATG CCGCCGGCCG CGGCGGGACG
GCCAGGCGGC GCACCGATCC GGACACAGAC GACGAGCCCG ACGAGCCCGA CGACGTGCCG
GACGACCCCG ACGACTACGC CGACGGCGAG CCCGCGGACG ACCTGCCCGC CGCCGATGCC
GGCATCGGCG GCGCCGGGCC GGGTGGCCCC CCGGCCGCGG CGGGCGGGCT CGCCCTGGCC
GGCTCCGGGG AGCCGCCGGC ACCACGGGCC GGCCGCGGAC GGCCCCCGCT GGGCAGCTGG
GACCCCGACG ACAGCTTCGC CCCTCGGTTC CCGCGGGCCG AGGCGACGCC GGCGCACTGC
CCGCACTGCC GGGCCCGCCC CGCGCCGACC GACCGGTTCT GCCTGCGCTG CCGGTACGAG
TTCGCCACCG GCCGGCGTCC GGTGGTGCCG CGGGTATACC CGGCACCCGC CGCGCCGCCG
CGCTGGGATG CGGTCGTCGA GGTCGACGAG GCCCACTTCG CCCGGGTGAT CGGGGACGGC
GTGCGCCTCC CCGAAGGCCG TCTCCCCTGG GTGGTCCACC TGGACGGGCC GGAGATCCTG
ATCGGCGCCG GGCCGGATGG CCCGCCGGCG GGCGTCGACC TGTCCGGGCC GGCGGACGAC
CCGGCGGTGT CCGGGCGGCA CGCGAGCCTC GTCCGGCAGC CGGACGGCGG CTACGCCGTC
GTCGACCACG GCTCCCTCAA CGGGACCAGG GTGAACGACA GCAGTCAGCC GATCCCGGCC
GGGCACCCCG TCTCGCTGCG TGACGGGGAC CGGGTGTTCG TCGGCGCCTG GACCCGGATC
ACGATCCGCC GCCCGTGA
 
Protein sequence
MSTETGPADG DEDSPHSEGE DEPAYRPPTG WLAGPGPGRA YPTPEPSGAT TQHAAGRGGT 
ARRRTDPDTD DEPDEPDDVP DDPDDYADGE PADDLPAADA GIGGAGPGGP PAAAGGLALA
GSGEPPAPRA GRGRPPLGSW DPDDSFAPRF PRAEATPAHC PHCRARPAPT DRFCLRCRYE
FATGRRPVVP RVYPAPAAPP RWDAVVEVDE AHFARVIGDG VRLPEGRLPW VVHLDGPEIL
IGAGPDGPPA GVDLSGPADD PAVSGRHASL VRQPDGGYAV VDHGSLNGTR VNDSSQPIPA
GHPVSLRDGD RVFVGAWTRI TIRRP