Gene Franean1_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2456 
Symbol 
ID5670852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2922714 
End bp2923367 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID641241373 
Productmethyltransferase type 11 
Protein accessionYP_001506794 
Protein GI158314286 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.161151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.897652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGT CTGCCCCGAG CTATCTGGCG ACCGTCGCGG CGGCGTACGA CGGTGTGGCC 
GAGGTGTATG CCGAGCGTTT CGCTGACGTG CTCGATCGCC AGCCGCTGGA GCGTGCGCTG
CTGGCCGCGT TCGCCGACGT CGTGCGCGAC CTCGCGGGCC CGGTCGCAGA CCTTGGCTGC
GGGCCCGGCT ATGCGACGGC CTACCTGCAC AGGTTGGGGC TGGACGTGTT CGGTGTGGAC
CTGTCGCCGG AGATGGTCGC CCTGGCTCGA AGCTCTCATC CAGGGTTGCG GTTCGAGGTG
GGCACGATGA CCGCGCTGGA CCTGCCGGAC CGCTCGGTCA GCGGTGCCCT CTGCCGCTAC
TCGCTCATCC ACACCCCGCC CGCCGACATC CCCGCCGTCC TCGCCGAGGT CCACCGCGTC
CTGGCGCCCG GCGGCCACCT GCTCCTCGGC TTCCTGGCCA CAGACGAGTC CGCGGCCGGG
GTGCACGCCT ACGACCATCG GGTGACAGGC GCCTACCGCT GGCCGCCCGA CCACCTCGCC
GAGTTGGCGC GGCAGGCAGG GCTTGTCGAG GTCGCCCAGC TGGTGCGAGC GCCGACGGAC
GAAGAACGAG GCCGACAGGC ACAGCTGCTG GCCCGCCGCC GGCAGGAGGC GTAA
 
Protein sequence
MAESAPSYLA TVAAAYDGVA EVYAERFADV LDRQPLERAL LAAFADVVRD LAGPVADLGC 
GPGYATAYLH RLGLDVFGVD LSPEMVALAR SSHPGLRFEV GTMTALDLPD RSVSGALCRY
SLIHTPPADI PAVLAEVHRV LAPGGHLLLG FLATDESAAG VHAYDHRVTG AYRWPPDHLA
ELARQAGLVE VAQLVRAPTD EERGRQAQLL ARRRQEA