| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2454 |
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| Symbol | |
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| ID | 5670850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2917687 |
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| End bp | 2919747 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641241371 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001506792 |
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| Protein GI | 158314284 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.928825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACCG GCGGCCGACC GGACCCACGT GAGGGTGTCC GTCCCAGGCT CCCCGCGACC
CGCGCCACGG GCGAGTGGCA GCCGGCCGAA TGGAACGTCC CGCGCCGCGA CCCGTTCTTC
GTGGGCCGCG ACGCGCTGCT CCAGCGCATC CACCGCGAAC TGCGCCCACC AGGAGTCGGC
CGGGGACCCG ACTTCGGCCG CGGGCGTGAC GCCAGCCGGG GGCGCAATGC AGGTCAGGGG
CGTGACATCG GCCGGGGGCG CAACATCGGG CTGGTGTCCG CGCGTGGCGC CGCCGGGATG
GGCGCGTCGC GGCTCGCCGT CGAGTACGCG CATCGGCATG CCGGAGACTA CGGCCTGGTG
TGGTGGGTGG ACGCGGACAC CCCCGAGCGC GCCGAGTCGT GCCTGGCCGA GCTGGCCGCC
GCCATCGCCC CGCCGGGGGC AGGCCACCGG GCCGCCGTGC TGCGCCGCCT GTGGGCCGAG
CTCGGCCAGC GCACGGACTG GCTGCTGATC TACGACGGTG TCGGTGATCC CCGCGACCTG
ACCGCCGTGG CACCGCCGGA CAGCGGCCGG CTGCTCGTGA CGAGCCGCGG ACCAGCGGTG
GCCAGGCTCA CCCCCGTGCT GCTCGAGGTC GGCGAGCTGC GCCGGGACGA GTCGGTCCTG
CTACTACGCC AGCACCACCG CGGAATCAGC CCGCCGGCCG CGGAGGCGCT TGCTTGTGTG
CTGGCGGACG TCCCCTTCGC GGTCGCGCTG GCCGGCCGCC ACCTGGCGAC GACCGGCCAG
CCGGTCGCCG ACTACCTGGC CCTGCTCGGG CGGGAGGCCG CTTCCGATCC GGTCGCCGCG
GCCGTCGCAG CGAGCCGCGC GCGACTGGAC GTGGTCGATC CGGCCGCGGC CGGCCTCCTC
GACCAGGTGG CGTTCCTCGC AGCGGACCCC CTGACGCTCA CCCGGGCGCC AGCCGGCACC
GCCGCCGCGG CCGCCCGGCT CGACCGCCTC GGCCTGGCCG ACTGGGACGG GGCCACGATC
CGCGTGCACG GGCACGTCCA GGCTCTGGTG CGCCGGCGGC TGGCCGGAGG CCGGCGGCCA
GCGGCCCTGC TCGGCGCGCA GCGGCTGCTG GTCTGTGCGT ACCTGCCCGG TCGCGACCCC
GCGGACCCGG CCTCATGGCC GTCACTCGCC ACGCTCGACC CGCACATCCG CACACTCACC
ACGTGGCTCG ACGACGAGTG CGCGGACTTC CGCCGGCTGG TGCTGCGCAC CGCCCGGTAC
CTGGCCGCCT CCGCCCGCTA CGAAGCCGGC GAACGGCTCA CGCACCAGGC ACGGGCCCTC
TGGGGCGGAC GGCTGGGCCC GGACCACCCG GACACGCTTG CCGCCGCCGA CCTCGAGGCC
TCGATCCGCG CCGACGGGTT CGCCGATCAC GACACCGCGC GGGCACTGCT GGGCGACGTC
CACGCCCGCC GGGTGCGGGT GCTCGGCGAG CAGCACCGCG ACACGCTGCA CTCGGCGTGG
AACCTGGCGC GCGCGGCCGG GGAGAGCGGC GACCACGACG AGTCCGCCCG CTTGCTGCGA
GACACCGTCG CCCGGCAGCG GGCGGAGCTC GGCCCGGACG ACCGCGACAC CCTGCGTTCG
GCGCACAGCC TCGGCCACGC CCTGACCCGG CTGGGGGAGT ACGGCGTGGC CCACGAGCTG
CTCGCGGAGA CGCTCGCCCG CCGCGGCCGG ACGTCCGGCG CCGCCCACCC GGACACCGTG
TGGACCGCGG CGGTGCTCGG CGTCGCGCTG CGTGGCCTCG GCCGTGGCGC GCACGCCCGC
GACCTGCACG CCCGCGCGCT GGCCGGCGCG CGGGCACAGC TCGGCGACGA GCATCCGCTG
ACCCTGTACG CGGCGCTGCA CCTCGCACTC GACCTGGCCG CCCTCGGCGC GGCCGACGCC
GGCCGGGACC TGTTCACCGA AGTCATCGGC TGGGACGTCG TCGGATGGCG CGACAACTCT
CCGTCGGGCC CACGAACCTG GGTCGCGCAG TGGGCCCGGG GCCACCAGGA GGACATCCGC
AGACTGTGGT CGGGTAGCTG A
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| Protein sequence | MLTGGRPDPR EGVRPRLPAT RATGEWQPAE WNVPRRDPFF VGRDALLQRI HRELRPPGVG
RGPDFGRGRD ASRGRNAGQG RDIGRGRNIG LVSARGAAGM GASRLAVEYA HRHAGDYGLV
WWVDADTPER AESCLAELAA AIAPPGAGHR AAVLRRLWAE LGQRTDWLLI YDGVGDPRDL
TAVAPPDSGR LLVTSRGPAV ARLTPVLLEV GELRRDESVL LLRQHHRGIS PPAAEALACV
LADVPFAVAL AGRHLATTGQ PVADYLALLG REAASDPVAA AVAASRARLD VVDPAAAGLL
DQVAFLAADP LTLTRAPAGT AAAAARLDRL GLADWDGATI RVHGHVQALV RRRLAGGRRP
AALLGAQRLL VCAYLPGRDP ADPASWPSLA TLDPHIRTLT TWLDDECADF RRLVLRTARY
LAASARYEAG ERLTHQARAL WGGRLGPDHP DTLAAADLEA SIRADGFADH DTARALLGDV
HARRVRVLGE QHRDTLHSAW NLARAAGESG DHDESARLLR DTVARQRAEL GPDDRDTLRS
AHSLGHALTR LGEYGVAHEL LAETLARRGR TSGAAHPDTV WTAAVLGVAL RGLGRGAHAR
DLHARALAGA RAQLGDEHPL TLYAALHLAL DLAALGAADA GRDLFTEVIG WDVVGWRDNS
PSGPRTWVAQ WARGHQEDIR RLWSGS
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