Gene Franean1_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2452 
Symbol 
ID5670848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2914393 
End bp2915064 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID641241369 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001506790 
Protein GI158314282 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.641383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACGC TCGACCGCCA CGACGACGTG TTCGTCCTCG ACATCGGCGA CGGGGAGAAC 
CGTTTCCATC CGGACTGGAT CGCCTCCGTC GAGGCGGCAC TGGACGAGGT GGAGAAGGCA
TCGGGGCCTC GGGCCCTGGT GACCGCCGCG ACCGGAAAGT ACTTCTCCAA TGGGTTGGAC
CTGGACTGGC TGCTCGCGAA CGCCGACCGG CCGCAGGAGT ACGCGGTCAG CGTCCACGAA
CTGCTGGCCC GGATGCTGGC CCTGCCGGTG GTCACCGTGG CCGCGCTGCA GGGGCACACG
TTCGCCGCGG GCGCGATGTT CTCCCTGGCG CACGACTTCC GGGTGATGCG GGCCGACCGC
GGCTACTGGT GCCTGCCCGA GGCCGACATC GACATCCCCT TCACCCCGGC GATGTCCGCG
CTGATCCAGG CCCGGCTGAG CCCGCAGACC GCGCACGAGG CAATGACCAC GGCCCGCCGC
TACGGCGGCC GCGACGCCTG CGCCGCCGCC ATCGTCGATC GCGCGGTGGC GGAGGAGGAG
GTACGCGGCA CCGGCGTGGA GATCGCGCGA GCCCAGGCCG GCCGGGCGGG GACCACCCTG
GGCACCATCA AGGCACGGAT GTACGCACCC GTCCTGGACG CCCTGCGCGA CCGGGAGCGT
CCCCTCGGCT GA
 
Protein sequence
MPTLDRHDDV FVLDIGDGEN RFHPDWIASV EAALDEVEKA SGPRALVTAA TGKYFSNGLD 
LDWLLANADR PQEYAVSVHE LLARMLALPV VTVAALQGHT FAAGAMFSLA HDFRVMRADR
GYWCLPEADI DIPFTPAMSA LIQARLSPQT AHEAMTTARR YGGRDACAAA IVDRAVAEEE
VRGTGVEIAR AQAGRAGTTL GTIKARMYAP VLDALRDRER PLG