| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2450 |
|---|
| Symbol | |
|---|
| ID | 5670846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2911614 |
|---|
| End bp | 2912954 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 641241367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506788 |
|---|
| Protein GI | 158314280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.454806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACG GTCAGACGGC CCCCGTCGCC GTCCAGGCAT CCCCGACCCA GGTGCCCCGC
CAGGCCCCCG GCCGGACCGG TCCCCGCAGT CCGCACACCG GCCGGCCCCG GTCCGGCGAG
GATGCCCGCC GCTCCGGCAC CGGCGGCCCC CGCACCGGCC AGCCGCTCCC CGGCGCCGAC
ACGGCCGTCG GCCAGTGGCC GGGAACCACC GGCTCGGCGC CGGGCACACC GCCGCGCCGC
CCCGGCTCCG TCCGGCGGAC GACCTCGATC ATGATGGAGC GCCCGGACGG CCTCACCGGC
CCGCTGCACC TCACCGGTGT CGGCCGTGAC CTGCTGACCA CCGCCGCGGG CGAGGTGGAG
GTCCTCGGCG AGGCGCGGCT GCGCGTCGTC CTCGACTACA TGGCCGCGCC CGGCCCCGTC
CTCGAGATCG AGTCCGAGCC CGCCGTTCCC GGCCTCGCGA GCCTGGTCGG CGCCTCGGCG
CGGGCCGGCT TCCGCGGCGC CGCCCGGCAG ATCCTCGCGG CCGCCGACGC CGCCGGCGCA
GAAGGCGACG CGGCCGACAG CAACGGCGAC GGAGCTGGTG GGGCGTCCAC CACCCGGCGC
TCGCTGCTCG AGCAGCTCCT CGACGACGTG CCCGTGGCGA CCCTGGTGTC GGGCTCCGCG
CTCGGGCGCA ACGGCATCTT CCGCGACGAC CCCTCGCGGC ACGCCGGCGC GGAGGCCGGC
GGCAACCCGA TGCTCGACGT CTGCGCCGGC TGGCAGCGGG AGGGGCTGCT CGCCCGCGTC
TCCGCCGAGC GCAGCGCCGA CCCCGAGGCC CCGGTGCGGA CGACCATGGT CGTGGCCGGC
GACCTCGCGG TCGACGAGGA CCCGCTCGGG TGGCATCCGC TGCCGCCGAT GGGCACCCAT
GCCATGCGCC GCCTGCGCCG CATCGACCTC GTCCCGATCG GCGGCGAGCC CGCCGGCACC
GGACCCGCCC GTACCGGTGC CGCGGACGGG GCCATCGACG GGGCCGCCGC CTTCCGGGTC
GACGCCTTCT TCCGTGACAC CTACCGGGAG GTGTCCGGCG CCGAGGTCGT CGTGCACGAG
TACGGGATCG ACGCCACGGT CGACCAGTCG GCCCGCGTCG TGCGCTCGGT GGGGCGGGCC
GGGGTCCTGC CGGGCCCCGA GTGCCCCCAG GCACTGGCCA GCGCCGAGCG CATCGTGGGG
CTCGGCGCCG CGGACCTGCG CCGCACCGTC TCGCGCACCT TCACAGGGAC GACCACGTGC
ACGCACCTCA ACGACACCCT GCGCTCCCTG GGCGATCTCC CCGACCTGAT CGAGCGGCTC
CGCTCGGCCA CCGCCCGCTG A
|
|---|
| Protein sequence | MAHGQTAPVA VQASPTQVPR QAPGRTGPRS PHTGRPRSGE DARRSGTGGP RTGQPLPGAD
TAVGQWPGTT GSAPGTPPRR PGSVRRTTSI MMERPDGLTG PLHLTGVGRD LLTTAAGEVE
VLGEARLRVV LDYMAAPGPV LEIESEPAVP GLASLVGASA RAGFRGAARQ ILAAADAAGA
EGDAADSNGD GAGGASTTRR SLLEQLLDDV PVATLVSGSA LGRNGIFRDD PSRHAGAEAG
GNPMLDVCAG WQREGLLARV SAERSADPEA PVRTTMVVAG DLAVDEDPLG WHPLPPMGTH
AMRRLRRIDL VPIGGEPAGT GPARTGAADG AIDGAAAFRV DAFFRDTYRE VSGAEVVVHE
YGIDATVDQS ARVVRSVGRA GVLPGPECPQ ALASAERIVG LGAADLRRTV SRTFTGTTTC
THLNDTLRSL GDLPDLIERL RSATAR
|
|---|
| |