| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2446 |
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| Symbol | |
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| ID | 5670842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2905603 |
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| End bp | 2906334 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641241363 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001506784 |
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| Protein GI | 158314276 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00126454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.145119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAGC CACTCGGCCT GCGGGACCGC AAGAAGCGGC GCACCCGCGA CGCGCTGTCC
GCCGCCGCCG TCTCACTGTT CCTGGAACGG GGCTTCGAGC GCGTCTCCGT CGCCGAGGTG
GCCGCGGCCG CCGAGGTGTC GAAACCGACG CTGTTCAGCT ACTTCCCGGC CAAGGAGGAC
CTCGTCCTCC ACCGCGTGCT CGACCACCGT GGTGAAGCGG CCCGGGTGGT GCGGGCGCGG
TCGGCTGACC AGTCGCCGCT CGCCGCTCTC GAGGCTCATT TCCTCGCGGG CCTGCGACAG
CACGAACCGG TCACCGGGCT GTGCGACGCG CCCGAGGTGC TCGCTTACCA TCGCCTGGTC
TTCTCGACCC CGAGCCTGCT GGGCCGGATG GCCCAGTACA CCGCCGCCGA CGAGGACGCC
CTGGCGGACG CGTTCGCCGA GGCGGCCGGC TCGCCCGCTG CCCAGGTGGA CGCGCGGCTC
GCCGCAGCGG CGGTCCTCAC CGTCCAACGG GTGCTGGCTC GGGAGAACTG GCGCCGCCTC
GACGCCGGCG CGGCCGCGGC GGACGTCCTG CCCGACGCCG AGGCGGCGGC CCGCCGGGCG
TTCGGCGCGC TCGCCGGACT CGCGAACCTC CCAGGACTCG CGAACCTTCC AGGTCTCGTG
GATCCCCCGG ACCGGGCGGA CTTCCCCGAT CGGACGGATC TTCAGGGTCG GACGGTGCCC
GGGGCCGGGT GA
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| Protein sequence | MTEPLGLRDR KKRRTRDALS AAAVSLFLER GFERVSVAEV AAAAEVSKPT LFSYFPAKED
LVLHRVLDHR GEAARVVRAR SADQSPLAAL EAHFLAGLRQ HEPVTGLCDA PEVLAYHRLV
FSTPSLLGRM AQYTAADEDA LADAFAEAAG SPAAQVDARL AAAAVLTVQR VLARENWRRL
DAGAAAADVL PDAEAAARRA FGALAGLANL PGLANLPGLV DPPDRADFPD RTDLQGRTVP
GAG
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