Gene Franean1_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2432 
Symbol 
ID5670828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2894045 
End bp2894824 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content77% 
IMG OID641241349 
Productmethyltransferase type 11 
Protein accessionYP_001506770 
Protein GI158314262 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.80949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.303283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTACTG GCACCGGCGA ACGCGGCGGT TTCCCGGATC AGCCCGGTGA TCTTCCCGGG 
CAGGGTGGCC CCGCGGCCGG CCGGGCTGGT CCGGGCGGCC CGGCGGGGGA GGCGCCGCCG
AGCCGTTGGG CGTCCCTGAC CGGTACGCGC GGCGGAGGTG CGCCGAGCGT CGCCGTGGGG
GACCGCTACG ACGAGCGGTT CGCGAGCCTC GCGGCCAGCG GCCTGGACAT TCACGGCGAG
GCGAGCTTCT GCGCCGCGCT CGTCCCCGCC GGTGCGCGGA TCCTCGACGC CGGCTGCGGC
ACCGGGCGGG TCGCCATCCG GCTCGCCGAG CTGGGCTGTT CATGCACCGG TGTCGATGTC
GACCCGTCGA TGCTCGCGCG GGCGAAGGCG GTGTCCGGCG AGGTGACCTG GATTCTCGGC
GATCTCGCGA ACCTGCCCGC CGCGCTCGCC GACCAGGGCG CCACGGCGCC GGCGGGCCGG
GCTGGCCCGT TCGACCTGGT CGTGGCGGCG GGCAACGTGA TCCCGCTGCT CGCGGAGGGC
ACGGAGGCGC ACGTGCTGCG GGTCCTCGCG GGCGTCCTGC GCCCGGGTGG CCTTCTGGTC
GCCGGGTTCG GCCTTGACGG CGCGCACCTG CCGCTGCCCG AGGCGCCCTT CGGCCTCGCC
GAGTACGACC GCTGGTGCGC GGGCGCGGGC CTCACCCTCG AGCGCCGCTT CGCGACCTGG
GACGGCGCGC CCGACCGTCC CGAGGACGGT TACGCCGTGA GCGTGCACTG CCGGGACTGA
 
Protein sequence
MVTGTGERGG FPDQPGDLPG QGGPAAGRAG PGGPAGEAPP SRWASLTGTR GGGAPSVAVG 
DRYDERFASL AASGLDIHGE ASFCAALVPA GARILDAGCG TGRVAIRLAE LGCSCTGVDV
DPSMLARAKA VSGEVTWILG DLANLPAALA DQGATAPAGR AGPFDLVVAA GNVIPLLAEG
TEAHVLRVLA GVLRPGGLLV AGFGLDGAHL PLPEAPFGLA EYDRWCAGAG LTLERRFATW
DGAPDRPEDG YAVSVHCRD