Gene Franean1_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2425 
Symbol 
ID5670821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2885689 
End bp2886828 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content74% 
IMG OID641241342 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001506763 
Protein GI158314255 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.55374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACCG GCGAACCCGG CGGCGGGGCC GGCGTGGTCA CTGGAGAGCT GCTTGAGCTC 
GCCGGGGTGC TTACCGACGT CCTGGCCGCG TACGACCTGG GGCCGGCCCC GGTGCCGGTC
CTGGTCAACA TCTCCGAGAA CATGACGTAC CGGATCGACG ACGTCGCCGG GGACCGTCGC
TGGGCGCTGC GGCTGCACAG GCCGGGCTAT CACGATGCCG CGGAGATCGT CGCCGAGCTG
GCCTGGGTGG CGGCGCTTCG GGCCGAGGGA GTGGTCGCCA CGCCACCCGT GGTGGCGAAC
CGGTTCGGAT CTGTGGTGAC CACGGTCCGG TCGGGGGATG CGATCCGGCA CGCGGTGCTG
TTCGAGTGGG TCGACGGGGT CTCACCCGAG CTCGGTGACA CCGCCGGGCT GATCTCCTCG
TTCGGTTTCC TTGGGGACAT CGCCGGCCGG ATGCACGACC ACGCCGCCCG CTGGTCGCGG
CCCTCCGGGT TCAGCCGTTT CGCCTGGTCC TGGCACGCGA CGCTCGGGCC GGGGGCGCGC
TGGGGGAGCT GGCGCGCCGG GGTGGCGGCG GTGCTGCCCG GCGAGGCGGA GCGCGTGGTC
ACGATGCTCG AACCGGCCGC GGCGGAGGTG GAGCGCGGGC TCGCCGCCTA TGGCCGCGGG
TCGGACCGCT TCGGGCTGAT CCACGCGGAC ATGCGCCTGG CCAACCTGCT CGTGGCCCGG
CCGGTCATGC CCCGAGCCCC TGGCCTGGCC GGCGAGATCC CGGCCGCCGA CCGTGCGGCC
GCCGGGCGGT CCGGTGCGGT GATCCACGTG ATCGACTTTG ACGACTGCGG CTTCGGCTGG
TACCTCTACG ACCTCGCCGC GGCGCTGTCG TTCATCGAGC ACAGCCCCGC CCTGCCGGCG
CTGGTCGCGG CCTGGCTGGA GGCCTACCGA GCCCACCGCC CGCTCGGGCC GGCGGACCTC
GCGGTCGTGC CGACGCTCGT TCTGCTGCGC CGGCTGCTGC TCGTCGCCTG GCTAGGTACC
CACCCGCACT CCGACGCCGT CCCCGATGCC GCCGTGTACG CCCGGGACAC CGCCGCGCTC
GCCGACCGCT ACCTCGCCCG CACCCTGCTG CCGGACCTCG CGCACCACTC CCGTCCGTAG
 
Protein sequence
MGTGEPGGGA GVVTGELLEL AGVLTDVLAA YDLGPAPVPV LVNISENMTY RIDDVAGDRR 
WALRLHRPGY HDAAEIVAEL AWVAALRAEG VVATPPVVAN RFGSVVTTVR SGDAIRHAVL
FEWVDGVSPE LGDTAGLISS FGFLGDIAGR MHDHAARWSR PSGFSRFAWS WHATLGPGAR
WGSWRAGVAA VLPGEAERVV TMLEPAAAEV ERGLAAYGRG SDRFGLIHAD MRLANLLVAR
PVMPRAPGLA GEIPAADRAA AGRSGAVIHV IDFDDCGFGW YLYDLAAALS FIEHSPALPA
LVAAWLEAYR AHRPLGPADL AVVPTLVLLR RLLLVAWLGT HPHSDAVPDA AVYARDTAAL
ADRYLARTLL PDLAHHSRP