| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2395 |
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| Symbol | |
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| ID | 5670791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2849760 |
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| End bp | 2850497 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641241312 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001506733 |
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| Protein GI | 158314225 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.17766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCAG ACCTGGCCGG CAAGCGTGCC CTGGTCACCG GCGGCACGCG CGGTATCGGC
CGGGCCGTCG TGCTCGGGCT CGCCCAGGCC GGCGCCACCG TCGTGGTCGG CCACCAGCGC
CAGACCGAGG ACGCCGAGAG CCTGCGCCGC GAGCTCAAGG ACACCGGCAA CGATCACCTG
CTGGTGCAGG CCGACGTCGC CGACCCGGCG CAGATCACCG AGCTGGTGTC GGCGACCGGC
ACCCACCTCG GCGGCCTCGA CATCGTCGTG AACAGCGTCG GGACGATCAG CCACATCCCG
TACGCCGACC TGCCGCTGGA CGCCTGGACG CAGGTGCTGA CCACCAACCT GACCGCGACC
CACCTCGTCA CCCAGGGTGC GCTGCCGCTG CTCGGCGACT CCGGGACGGT CGTCAACATC
GGGTCCGGCG CCGGGCTCGT CGGCGTGCCG CTGCGCGCCC ACTACACGGC GGCCAAGACG
GGCCTGATCG GCCTCACCCG CTCGCTGTCC AAGGAGCTCG GCTCCAAGGG CATCCGGGTG
AACCTGGTCT CGCCGGGCGT CATCGAGACC GACCAGGCGG CCGGCATGCC CCCGGCGGCG
CGCGCCGCGT ACACCAACCG CATCCCGCTG GGCCGGCTCG GCGAGGCCAA CGAGGTCGCC
GCCGTCGTCC TGTTCCTCGC CAGCGACGTG TCCAGCTACG TCAACGGCGC CACCTTCACG
GTCGACGGAG GAATCTGA
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| Protein sequence | MFPDLAGKRA LVTGGTRGIG RAVVLGLAQA GATVVVGHQR QTEDAESLRR ELKDTGNDHL
LVQADVADPA QITELVSATG THLGGLDIVV NSVGTISHIP YADLPLDAWT QVLTTNLTAT
HLVTQGALPL LGDSGTVVNI GSGAGLVGVP LRAHYTAAKT GLIGLTRSLS KELGSKGIRV
NLVSPGVIET DQAAGMPPAA RAAYTNRIPL GRLGEANEVA AVVLFLASDV SSYVNGATFT
VDGGI
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