Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2388 |
Symbol | |
ID | 5670784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2843681 |
End bp | 2844679 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641241305 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001506726 |
Protein GI | 158314218 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.978656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.976658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGGAGC TTCTTGGTCT CGACGACGTC ACGCTGTCGG CCTACCGGTT GTGGCTGAGA CATCCCGACA TGGATGTCGA CGGGGTGGCC ACGGCGGTGG GGCAGGCGAA CGACACAGTC CGCCGGTCAC GGGACCGGCT CGTCGAGCTG TCACTGCTGT TGCCCTCCAC CGAACACCCC GGCCACCTGG TCGCCGTCCA CCCGGAGGCC GGTCTGGAGC ATCTGCTCCA GGCTCAGCAC GAGGCACTCA TCCGCCGCCA CGAGCGGCTT GTCCGGGCAC GGGCGCAGGT GAGCACGTTC GTCTCGGAGT ACCTGGACAA CCGGCCCGGT GGGGACGGCG CGGAGGTCGA GCACATCGAC AGCGCCGACC AGGCCCGGGC CGAACTGCTC ACCCTTGTCG GCCGGGCCGA GAAGGAGGTG CTCGCGCTGC ACACCCGGCG CGGCCGCCCG CCGGCGTTGA CCGCGGAGGT TCTCCCGGTC GAGCTGCGGG CGCTGCAGCG CGGTGTGGCG ATGCGCAGCG TCCTCCCACG CACGGTCAGC ACCGACGAGA CGGGTGTCGG CTACGTCCGC ACGGTCGCCT CGCACGGCCT GGAGGCCCGG CTCGCCGACG ACCCGCGCAT CGACGCGACG ACCGTGGACG GCCGGGTCGG GCTGGTGCAG TTCGTGCAGC ACGGCACCGA CCCGCACGCG CTGATCGTGC GCTCGCCCGC GCTGGCGAAC CTGGTCACCA TGCTGTTCGA GCAGGTCTGG GACAGCGCCG AGCCGCTGGC CGCGGAGGCC GACGGCGACC TGGAGAGCCC TGCGGACGAC CGGCCGAACG ACACCGAGCG GCTGCTTTTA AGGCTGCTCA GCCTGGGTGT GAAGGACGAG GCAGCGGCCC GCCATCTCGG GGTGTCCGTC CGTACGGTGC GTCGGATGGT CGCCGACCTC ATGACCCGCC TGGACGCCCG TAGCCGCTTT CAGGCCGGGA CGGTCGCGGC CCGGCGGGGT TGGTTGTAG
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Protein sequence | MLELLGLDDV TLSAYRLWLR HPDMDVDGVA TAVGQANDTV RRSRDRLVEL SLLLPSTEHP GHLVAVHPEA GLEHLLQAQH EALIRRHERL VRARAQVSTF VSEYLDNRPG GDGAEVEHID SADQARAELL TLVGRAEKEV LALHTRRGRP PALTAEVLPV ELRALQRGVA MRSVLPRTVS TDETGVGYVR TVASHGLEAR LADDPRIDAT TVDGRVGLVQ FVQHGTDPHA LIVRSPALAN LVTMLFEQVW DSAEPLAAEA DGDLESPADD RPNDTERLLL RLLSLGVKDE AAARHLGVSV RTVRRMVADL MTRLDARSRF QAGTVAARRG WL
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