| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2377 |
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| Symbol | |
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| ID | 5670773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2828058 |
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| End bp | 2829614 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641241294 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001506715 |
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| Protein GI | 158314207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.873986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGAG GCCAACTCGA CGGCACAGAC ACACTGGATG GCACGGACGC ACTCGACGGC
ACGGATACCC CGAACGGCGC GCAGACTTCG ACAGCCCAGG CCGCGCAGGT CCGGGCGGCG
ACGGTCCGGG CCTTCGAGCA TGTCGCGGGG TACCTGGACG GCCTGCGGGA ACGCCCCGTC
GCCCCGGCCT CGGGATACGA GAAGATCCGC GCCCAGCTCG GCGGGCCGCT GCCGGCCGGG
CCCTGCGATC CCGTCGAGGT CGTCGACACG CTCGCCGCCG CGGCGGCCGA CGGGCTCACC
GCCACCGGGT CGCCCCGCTT CTTCGGGTAC GTGATCGGCG GGATCGTGCC CGCGGCGCTG
GCCGCCGACG TGATGGCCGT CGCCTGGGAC CAGAACGCGG GCCTGTCCAG CCTGGCCCCG
GCGGCCGCCG CCGCCGAGTC GGTGGCCGGG TCGTGGGTCA AGGAGCTGCT CGGGCTGCCC
GCGTCCGCCT CGGTCGGGAT CACCACCGGC ACACAGATGG CGCACGTGAC CGCGCTGGGC
GCCGCACGGC ACCGGGTGCT GGCCCGCCAC GGTTGGGATG TGGAGGCCGA CGGCCTGCAC
GGGGCCCCGC CGGTGCGCGT TCTCGTGGGC GCCGACCGGC ACACCACGGT GGACGTCGCG
CTGCGCCTGC TGGGGTTCGG CACCCGCCGG CTGACGGTGG TGGCCGCGGA CGAGGCGGGG
CGGATGCGGC CCGACGCGCT GCGCGCGGCG CTCGCGGACG GGTCCGGCCC GGCGATCGTG
GTGGCCCAGG CCGGCGAGAT CAACACCGGC GCCTTCGACC CGCTCGCGGA GATCTGCGCG
ATCGGCCACG AGCACGGGGC GTGGGTGCAT GTGGACGGCG CCTTCGGGCT GTGGGCAGCC
GTGTCCGCGT CGGCCCGGCG CCGGGACCTG GTCGCGGGGA TGGCGGCTGC CGACTCCTGG
GCCACGGACG GGCACAAGTG GCTCAACGTG GCCTACGACT GCGGGATCGC GATCGTCGCC
GACGAGCGGG CGCACCGGGC GGCGATGTCC ACCCGGGCGG ACTACCTCGT CCACGCCACG
GACGGCGAGC TCGACCCCCT GGAGTGGACG CCGGAGTTCA GCCGGCGGGC CCGCGGGTTC
GCCCTGTACG CCGCGCTGCG CTCGCTCGGG CGGTCGGGCC TGACCGAGCT GGTCGACCGC
TGCTGCGCGC ACGCGCGGCG CTTCGCCGTG TCCCTCGCCG CGCTGGACGG CGTCGCGGTG
CTCAACGAGG TCGAGCTCAA CCAGGTGCTG GTGCGGGTGG ACGACGACGA CGCGACGACC
GCCGCGACCA CGGATCTGGT GGTCGCGGGC GGGGAGGCGT TCGTGTCGGG CACGGTGTGG
CGCGGCCGGG TGGCGATGCG GGTCTCGGTC TGCAACTGGA CGACGACCGA GGCCGACGTC
GACCGGGCGG TGGCGGCGGT GGCGGCCGCC GCCACCGGGG CCCGCGCCGG CAACCGCCCC
CGCGCCGCCG CCGCCCACAC GACCAGCCAT CCTCGCGCGG GCTCGGCAGG CGGGTAG
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| Protein sequence | MAGGQLDGTD TLDGTDALDG TDTPNGAQTS TAQAAQVRAA TVRAFEHVAG YLDGLRERPV
APASGYEKIR AQLGGPLPAG PCDPVEVVDT LAAAAADGLT ATGSPRFFGY VIGGIVPAAL
AADVMAVAWD QNAGLSSLAP AAAAAESVAG SWVKELLGLP ASASVGITTG TQMAHVTALG
AARHRVLARH GWDVEADGLH GAPPVRVLVG ADRHTTVDVA LRLLGFGTRR LTVVAADEAG
RMRPDALRAA LADGSGPAIV VAQAGEINTG AFDPLAEICA IGHEHGAWVH VDGAFGLWAA
VSASARRRDL VAGMAAADSW ATDGHKWLNV AYDCGIAIVA DERAHRAAMS TRADYLVHAT
DGELDPLEWT PEFSRRARGF ALYAALRSLG RSGLTELVDR CCAHARRFAV SLAALDGVAV
LNEVELNQVL VRVDDDDATT AATTDLVVAG GEAFVSGTVW RGRVAMRVSV CNWTTTEADV
DRAVAAVAAA ATGARAGNRP RAAAAHTTSH PRAGSAGG
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