| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2376 |
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| Symbol | dnaE |
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| ID | 5670772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2824105 |
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| End bp | 2827641 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641241293 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001506714 |
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| Protein GI | 158314206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.51094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACT CTTTCGTCCA CCTTCACGTT CACACCGAGT ACTCGATGCT CGACGGTGCG
GCACGACTCA AGGACATGTT CAACGAGGTC TCGCGGCAGG GCATGCCCGC CGTGGCGATC
ACCGACCACG GCTACATGTA CGGGGCGTAC GACTTCTACA AGCAGGCGAC CGCGGCGGGC
GTGAAACCGA TCATCGGCTG CGAGGCATAC GTCGCGCCGG AATCACGGCT GCTCAAGCAG
CGCGTCCGCT GGGGCGAGCC GCACCAGAAG AGCGACGACG TCTCCGGTGG TGGCTCCTAC
ACCCACATGA CGATATGGGC GCGGAACGCC GAGGGCCTGC ACAACCTTTT CCGGCTCAAT
TCCCGGGCGT CCATCGAGGG CCATTACATC AAGTGGCCAC GCATGGACCA GGAGATCATC
TCCGAGCACG CCGCGGGCCT GATGGCGACG ACCGGGTGCC CGTCCGGAGA GGTCCAGACG
AGGCTGCGGC TCGGCCAGTA CGACGCCGCG CTGAAGGCCG CCGCGACTTA CCAGGAGATC
TACGGCCGCG ACAACTACTA CTGCGAGATC ATGGACCACG GCATCGAGAT CGAGCGCCGG
GTCCGTGACG GGCTGGTCGA CATCGCCCGC GCGCTCGACA TGCGTTTCGT GGTCACCAAC
GACTCGCACT ACACCTACGA GTCCGAGCGG ACGACCCACG CCGCGCTGCT GTGCGTCCAG
ACCGCCTCGA CGGTGGCGAA CCCGTCCTTC CAGTTCGAGG GCTCGGGCTA CTTCCTGAAG
AGCGCCGAGC AGATGTACGC GATCGACACG TCCGACGCCT GGCAGCAGGG CTGCGAGACG
ACGCTGATGA TCGCCGAGCG GGTCGACCCG GCCGGCATGT TCACCAAGCA GAACCTGATG
CCGCGCTTCC CCGTCCCCGA GGGGGAGACC GACGAGTCGT GGTTCCGCAA GGAGACCTGG
GCGGGCATGG CCCGCCGCTT CCCCGACGGG TTCGACGAGG AGCACCGCGC CCGGGTCGAG
TACGAGCTCG GGGTCATCCT CGCGATGGGC TTCCCGTCCT ACTTCCTGGT GGTCGCCGAC
TTCATCATGT GGGCGAAGAG CCAGGGAATC CCGGTCGGCC CCGGGCGCGG GAGCGCGGCG
GGCTCCATGG TCGCCTTCGC CCTGGGCATC ACCGACCTCG ACCCCATCCC GCACAGCCTG
CTGTTCGAGC GGTTCCTCAA CCCCGACCGC GTCTCGATGC CGGATATCGA CATCGACTTC
GACGAACGTC GGCGCGGTGA CGTGATCCGC TACGTCACCG AGAAGTGGGG CGACGACCGC
ATCGCCCAGA TCGTCACCTA CGGCACCATC AAGGCGAAGG CCGCCATCAA GGACTCCTCC
CGGGTCCTCG GCTACCCCTA CGCGGTGGGC GACCGGATCA CCAAGGCGAT GCCGCCGGCC
GTCATGGGCA AGGACATCCC ACTCGGCGGG ATCTTCGATC CCAAGCACCC CCGCTACAGC
GAGGCCGGCG AGATCCGGGG TCTCTACGAG TCCGACGCGG ACGTCCGCAA GGTCATCGAC
ACGGCGAAGG GCCTGGAGGG GCTCATCCGC CAGGCGGGCG TGCACGCCGC CGGTGTGATC
ATGTCAGCTG AACCGATCAT CGACCACATC CCGGTGTGGC GCCGCGACGC CGACGGCGCG
ATCATCACGC AGTTCGACTA CCCGACCTGC GAGAACCTCG GCCTGCTGAA GATGGACTTC
CTCGGCCTGC GCAACCTCAC CGTGATGGAC GACGCGGTGC GCAACGTGGA GGCGAACCGC
GGCTTCAAGA TCGACCTGAT GGGCCTGGAG CTCAACGACG CCGCGTCCTA CGAGCTGCTC
GCCCGCGGCG ACACCCTCGG GGTGTTCCAG CTCGACGGCG GGCCGATGCG CTCACTGCTG
CGGATGATGC GCCCGGACAA CTTCGAGGAC ATCTCCGCCG TCCTCGCGCT GTACCGGCCG
GGGCCGATGG GCGCCAACTC GCACATCAAC TACGCGCTGC GCAAGAACGG CCAGCAGGAG
ATCACCCCGA TCCATCCCGA GCTCGCCGAG CCGCTGGCCG ACATCCTGGA CACCACCCAC
GGCCTGATCG TGTACCAGGA GCAGGTCATG GCCATCGCGC AGAAGGTCGC CGGCTACACG
CTCGGCCAGG CCGACCTGCT GCGCCGCGCG ATGGGCAAGA AGAAGAAGGA GATCCTCGAC
AAGGAGTTCG TGCCGTTCTC CGACGGCATG AAGTCCAGCG GGTTCTCCGA GGCCGCCATC
AAGACCCTGT GGGACATTCT CGTCCCCTTC TCCGACTACG CCTTCAACAA GGCGCACACC
GCCGGCTACG GCCTGGTCTC CTACTGGACG GCCTACCTCA AGGCGAACTT CCCGGCCGAG
TACATGGCGG CGCTCCTGAC CTCGGTACGC GACGACAAAG ACAAAAGCGC GATCTACCTC
AACGAGTGCC GGCGGATGGG AATCCGCGTC CTGCCGCCGG ACGTGAACAC CTCCGACGCC
GACTACACCG CGCACGGCGA CAACGAGATC AGGGTCGGCC TCGCCGCGAT CCGCAACGTC
GGAATCAACG TCGTCGAGTC GATCGTGCGC AACCGGAAGA CGAAGAGCCG GTTCACCTCG
TTCCCCGACT TCCTCGACAA GGTCGACGCC GTCGCCTGCA ACAAGCGCAC GGTCGAGTCA
CTCATCAAGG CCGGTGCGTT CGACGCCCTC GGCCACACCC GCCGCGGCCT GGTGGAGAAA
CACGAACAGG CCGTCGACGC GGTGATGGGC GTGAAGAAGA AGAACGCCGA GGGTCAGTTC
GACCTCTTCG CCTTCGACGG CGAGGACGCC GAGGAGGACA CCGCCCCCAT CTTCGGCGTG
CAGGAGTTCT CCGACCAGGA ATGGGACAAG TCCGTACTGC TCTCCCACGA GCGGGAGATG
CTCGGGCTCT ACGTCTCGGA CCATCCGCTG CTCGGGGTCG AGCACATCCT CGCGGCGAAG
GCCGACTGCG GCATCGCCTC CCTCAACGGC GGCGACTACC CGGACGGCTC GGTCGTCACC
ATCGGCGGGA TCATCTCCAG CCTGCAACGC AAGGTGACCA AGCAGGGGAA GCTGTGGGCC
CTGGCCACCG TGGAGGACCT CGAGGGCGGC CTGGAGGTCA TGTTCTTCCC GGCGACCTAC
GAGACCTGCT CGACCCAGCT CGCCGAGGAC GCGGTCGTCA TCGTCAAGGG GCGGGTCGAC
AAGCGGGAGG ACACCCCGCG CCTGGTCGCC TCGGATCTGA CCGTGCCCGA CCTCAGCGAG
CACTCCCTGA GCCCGCCGGT GGTGATCACC CTGCCGGCGT CGCGGGTCAA CCCGCCCACC
GTCGATCGGC TGCGCGAGGT GCTCGGTGAC CACCCCGGCA CCACCGAGGT CCACCTGCGC
CTGCAGTCGG CGAGCCGCAC GACCCTGCTC CGGCTCGACG ACGCTTACAA GGTGCAGCGG
ACGGCCGCGC TGATGGGTGA CCTCAAGGCC CTGCTAGGGG CCTCCGCCGT CGCCTGA
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| Protein sequence | MPNSFVHLHV HTEYSMLDGA ARLKDMFNEV SRQGMPAVAI TDHGYMYGAY DFYKQATAAG
VKPIIGCEAY VAPESRLLKQ RVRWGEPHQK SDDVSGGGSY THMTIWARNA EGLHNLFRLN
SRASIEGHYI KWPRMDQEII SEHAAGLMAT TGCPSGEVQT RLRLGQYDAA LKAAATYQEI
YGRDNYYCEI MDHGIEIERR VRDGLVDIAR ALDMRFVVTN DSHYTYESER TTHAALLCVQ
TASTVANPSF QFEGSGYFLK SAEQMYAIDT SDAWQQGCET TLMIAERVDP AGMFTKQNLM
PRFPVPEGET DESWFRKETW AGMARRFPDG FDEEHRARVE YELGVILAMG FPSYFLVVAD
FIMWAKSQGI PVGPGRGSAA GSMVAFALGI TDLDPIPHSL LFERFLNPDR VSMPDIDIDF
DERRRGDVIR YVTEKWGDDR IAQIVTYGTI KAKAAIKDSS RVLGYPYAVG DRITKAMPPA
VMGKDIPLGG IFDPKHPRYS EAGEIRGLYE SDADVRKVID TAKGLEGLIR QAGVHAAGVI
MSAEPIIDHI PVWRRDADGA IITQFDYPTC ENLGLLKMDF LGLRNLTVMD DAVRNVEANR
GFKIDLMGLE LNDAASYELL ARGDTLGVFQ LDGGPMRSLL RMMRPDNFED ISAVLALYRP
GPMGANSHIN YALRKNGQQE ITPIHPELAE PLADILDTTH GLIVYQEQVM AIAQKVAGYT
LGQADLLRRA MGKKKKEILD KEFVPFSDGM KSSGFSEAAI KTLWDILVPF SDYAFNKAHT
AGYGLVSYWT AYLKANFPAE YMAALLTSVR DDKDKSAIYL NECRRMGIRV LPPDVNTSDA
DYTAHGDNEI RVGLAAIRNV GINVVESIVR NRKTKSRFTS FPDFLDKVDA VACNKRTVES
LIKAGAFDAL GHTRRGLVEK HEQAVDAVMG VKKKNAEGQF DLFAFDGEDA EEDTAPIFGV
QEFSDQEWDK SVLLSHEREM LGLYVSDHPL LGVEHILAAK ADCGIASLNG GDYPDGSVVT
IGGIISSLQR KVTKQGKLWA LATVEDLEGG LEVMFFPATY ETCSTQLAED AVVIVKGRVD
KREDTPRLVA SDLTVPDLSE HSLSPPVVIT LPASRVNPPT VDRLREVLGD HPGTTEVHLR
LQSASRTTLL RLDDAYKVQR TAALMGDLKA LLGASAVA
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