Gene Franean1_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2375 
Symbol 
ID5670771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2822290 
End bp2823774 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content74% 
IMG OID641241292 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_001506713 
Protein GI158314205 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.241919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCG ATCGTCCCGT CGACACAGAA CCCGACCAAT CCGCGCTCGA CCAATCCGCG 
CTCGACCAGC CCGCGCTCGA TCACCAACCC GCCGCCGCGA CACGGCCGGA CCGGCCCTCA
GCGCCGCCGC TGACGGCCGA CGCGGGGCCG CCTCGGCAGT GGAGCCCCCC GACGACCCGG
CCCGCGGGCT TCGACTGGCC GTCTGAGGTC GACCGGGCCG GCCGGGACCT GCTGCTCGAC
CTGTTCGGGC CCGACCCGGA AGTCCGCGTC GAGATGTGGG ACGGGTTCAT CCTCGGGCCC
GACACCTCGA CGAAGGTGGT CATCCGCTCG CCGCACGCGC TGCGACGGGC GCTGTTCCAC
CCCGGCGAGC TGGGGTTCGC CCGCGCCTAC GTGGCCGGCG ACGTCGAGAT CGACGGGGAC
GTCTTCGCCG CGCTGGCACT GCGGGAGCGG ATCGCGCGGC TGCGGCCGTC CCCGGCGGCG
GTGCGGGCGC TGGCGGTGCT CGTCCGCCAG TTCGGCCCGC GGCCGCCGCA GCCGCCTCCA
GAGGAGGCCC GGATGCGTAG GCACGGCCGG CAGCACAGCC GTTCCCGCGA CGCCGCCGCG
ATCTCCCACC ACTACGACGT CTCGAACGAC TTCTACCGGC TGGTCCTCGG GCCGTCCATG
ACCTACTCGT GCGCGGTCTG GGACTCACCG GCGGCCACCA GACTGACCGC CGCGCAGACA
GCCAAGCACG AGCTGGTCTG CCGCAAGCTC GGTCTGCGGC CCGGCGAGCG GCTGCTGGAC
ATCGGCTGCG GCTGGGGCAG CATGGCGCTA CATGCCGCGC GCCACCACGG TGTCCAGGCG
GTGGGGATCA CGATCTCCGC GGAGCAGGCG GCCGAGGCAC GCCGCCGGGT CACCGAGGCG
GGCCTGGAAG ACAAGATCGA GATCCGCCTG CAGGACTACC GGGAGATCAC CGACGGCCCG
TTCGACGCGA TCAGCTCGGT GGGCATGGTC GAGCACGTCG GCCGGGCGAA GCTGCCGATC
TACTTCGACA ACCTGTTCCA CCTGCTCCGG CCGGGCGGGC GGCTGCTCAA CCACGGCATC
TCCTTCCCCG GCGACCCGGT CGGGGCCGCC CGCGGCCGGC CGCGGCTCGG TCCGCTCCCA
CTGCCCCGCG ACGCCGACTT CCTGCACCGC TACGTCTTCC CCGACGGGGA GCTGCACGAG
ATCGGCGCGC TCGTCACACT GATGCAGGCC GGCGGCTTCG AGGTGCGCCA TGTGGAGAAC
CTGCGCGAGC ACTACGCGCT GACGCTGCGG GCGTGGGTCG CCAACCTGGA GAACCGGTGG
GACGAGGCGG TCGCGCTGGT CGGGGCGGGC CGGGCCCGGG TGTGGCGGCT GTACATGGCC
GGCTCCGCGC TCAGCTTCGA GGCCGGCCGG TCGCAGATCC ACCAGGTGCT CGGCGTGCGC
CCCGATTCCG GCGCCTCGCA CCAGCCACTG CGGCCGTCGT ACTGA
 
Protein sequence
MTVDRPVDTE PDQSALDQSA LDQPALDHQP AAATRPDRPS APPLTADAGP PRQWSPPTTR 
PAGFDWPSEV DRAGRDLLLD LFGPDPEVRV EMWDGFILGP DTSTKVVIRS PHALRRALFH
PGELGFARAY VAGDVEIDGD VFAALALRER IARLRPSPAA VRALAVLVRQ FGPRPPQPPP
EEARMRRHGR QHSRSRDAAA ISHHYDVSND FYRLVLGPSM TYSCAVWDSP AATRLTAAQT
AKHELVCRKL GLRPGERLLD IGCGWGSMAL HAARHHGVQA VGITISAEQA AEARRRVTEA
GLEDKIEIRL QDYREITDGP FDAISSVGMV EHVGRAKLPI YFDNLFHLLR PGGRLLNHGI
SFPGDPVGAA RGRPRLGPLP LPRDADFLHR YVFPDGELHE IGALVTLMQA GGFEVRHVEN
LREHYALTLR AWVANLENRW DEAVALVGAG RARVWRLYMA GSALSFEAGR SQIHQVLGVR
PDSGASHQPL RPSY