| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2342 |
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| Symbol | |
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| ID | 5670740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2790377 |
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| End bp | 2792641 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641241261 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001506682 |
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| Protein GI | 158314174 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGCA CGGCGAGCGA GGGGCGGCGA GCGACGTTGG CGACTGCTCC TTCTCGCCGG
ATGGATCACG GTGGCAGCCG GCCTGGTCAT CACTTCCGTC AGGGCGTTGT TCTCGGGCCA
GAGCCCGGTG CCACCCTTGT CGGGGACGGA GCCGGCGTAT CTGGCGTTCA TTCCAGCATC
CGTTGCCGCG CTGCTGGCTT TTCCTACCGA CCCACTCAGC CCGGAGGACG AGCCGGTGCG
CCGAGCCGGC CAGCACGGCA CCCATTGGCG GGCTGTCACC GTCATGGACG CGGTGCTCCT
CGCCGGCTCG CTGAGCCTGC TCGGCTGGGT GGTCGTCCTC CAGCCTCTGG TACGTGCGCG
AGCACCCGCA CCAGCCAGTC TCGCGGCCTT GTTGGCGTTC GGCATCGGAT GTCTCCTGCT
ACTGATCACC GTCCTGCTCG TAGCGGCGTT CCGACGCCCG CGCCAGAAGA ATTCATTCGA
ATTGCTCGGT GGCGGGCTGG CCTCCATCAC CATACTTCTG CACGTGTCGC TCTACTTCAT
CGCGAGCGGC CAACCGGAGC CCCTGCAACT CGAAGCCGCC AACGCCATTG GCACTGTGAT
GATCGGGCTT GCCTGCATCG CGCCACCACG GCCATCGACT GGCTCTGTAG TTGCCGCTGC
CCCCTAAGTC TCGAATCCGC TCCTGACTCG TGGCGCGTCC GGTGGGCTGG CTGGCGGGCC
GGACCCGGCG TACGCTGGGT GAGGATATTC CTCCCGTACG TTCCGCTGTC CGCGCTGGGC
GTGCTGGCGG TCATTCAGAT GTCAACCGAG GCGCGGGTCG AACCGATCGA AATATACGGT
ATCTTCGCGC TCGTGCTGAT GGTGCTGATC CGGCAGATGC TGACTTTGGC GGACAACCAG
AAGCTGCTGG ACAGGGTTCA GCGCAGCCGT CGCCAGCTGC GCCACCAGGC ACTCCATGAC
CCGCTGACCG GGCTGGCGAA CCGTGTGCTG TTCGGTGACC GGGTGGAAGA GGCGGTCGCT
CGGCGAGCCC GCGGCCGGCT GGCTCTGCTC TTCTGCGATC TCGATGACTT CAAGAGTGTC
AACGACACCC TGGGTCATCC GGCCGGGGAC GAATTGCTGA GGATAACCGC TCGGCGGCTG
CTTGGTTGCG TACCGCCCTC GGACACGGTC GCCCGTCTCG GTGGCGACGA GTTCGCGGTT
CTTTTGGCGG ACGATGCCGC GGACGCCGAG GCGGTCGGCA AGAGGGCGGC CGCGGTGGTC
CGGGCACCGT GCTTTCTTGC CGGGCAACCG TGCGCCATTC ACGCGAGCCT TGGCCTGACA
GTCACCGTGC CGGGATCCTC GATAAGTGCC GAGGATCTGG TCCAGCAGGC GGATCTCGCC
ATGTACGCAG CCAAGCGGCG GGGGAAAAAC AGTCTGGTCG TCTACGATCC TGACATCTTC
GCTCACGGCC GGTCGCCGAC GGCGCAACTC GCGCTGTCCC AGTTGTTGCG GGGCGATCCC
GCCGGCGGCG TCATCGATGT CCTCTATCAG CCGATCGTCG ATCTGATACA CCATCACACG
GTCGCGTTTC AGGCTTCAAC GTGCTGGCAC CATCCGACGC TCGGGTCGTT CACGGCAGAG
CAGACGGTCA CGGTCGCGAC CGGAGTGGGG CTAAGAGCAC AGCTCGAACA GTTGATCCTC
GGCCGCGCTT GCCATGATAT CGGCCACTAC CGAAGGCAGA CAGGGCAGAA CGTCGCCGTC
TGCGTCGGCG TTTCGGCGGC GAGGCCGGCT GGTGACTTAC TGCCCGACGT CGAGGCGGCG
CTGGTGGCCT CCCGCCTCCC CGCCCAGGCC CTGATCCTCA AGCTTACGGA CATGGAGTGC
CTCGACGAGG AGGCCGCGCG CAGCCTGCGG ACATGCGTCA CCCGTGGCCT GCGCCTCGCG
CTGAACGCCA TCGCCAGGAA CCAGAGCACC TTTCTGGCGC TCGACGAGCT GCCGATCCAG
ATACTCATGT TCGACAGCTC CTACGCCGGC GGCCTGACGG GCAGCGCCAA CCGGGCCGAC
CTGCTCCGCC GGGCACTGCT CGCCCTCGCC AGGGACCTCG GTCTCACGGT CGTTGCCACC
GGCGTCCAGA ACCGAGAGCA GGCACGCACA TTGGCGCACC ATGGCTGCCG CTTCGGACAA
GGACAGTTCT TCGGACCGCC AGCCGCACTG CCTGGTCGGC CGCAGCCTCA CCGCAATGGC
GACGCCGACG GCCGGGCTGG TTACGGGAAC GGGAACCGGC GGTAA
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| Protein sequence | MVGTASEGRR ATLATAPSRR MDHGGSRPGH HFRQGVVLGP EPGATLVGDG AGVSGVHSSI
RCRAAGFSYR PTQPGGRAGA PSRPARHPLA GCHRHGRGAP RRLAEPARLG GRPPASGTCA
STRTSQSRGL VGVRHRMSPA TDHRPARSGV PTPAPEEFIR IARWRAGLHH HTSARVALLH
RERPTGAPAT RSRQRHWHCD DRACLHRATT AIDWLCSCRC PLSLESAPDS WRVRWAGWRA
GPGVRWVRIF LPYVPLSALG VLAVIQMSTE ARVEPIEIYG IFALVLMVLI RQMLTLADNQ
KLLDRVQRSR RQLRHQALHD PLTGLANRVL FGDRVEEAVA RRARGRLALL FCDLDDFKSV
NDTLGHPAGD ELLRITARRL LGCVPPSDTV ARLGGDEFAV LLADDAADAE AVGKRAAAVV
RAPCFLAGQP CAIHASLGLT VTVPGSSISA EDLVQQADLA MYAAKRRGKN SLVVYDPDIF
AHGRSPTAQL ALSQLLRGDP AGGVIDVLYQ PIVDLIHHHT VAFQASTCWH HPTLGSFTAE
QTVTVATGVG LRAQLEQLIL GRACHDIGHY RRQTGQNVAV CVGVSAARPA GDLLPDVEAA
LVASRLPAQA LILKLTDMEC LDEEAARSLR TCVTRGLRLA LNAIARNQST FLALDELPIQ
ILMFDSSYAG GLTGSANRAD LLRRALLALA RDLGLTVVAT GVQNREQART LAHHGCRFGQ
GQFFGPPAAL PGRPQPHRNG DADGRAGYGN GNRR
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