| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2330 |
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| Symbol | |
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| ID | 5670728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2778906 |
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| End bp | 2779583 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241249 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001506670 |
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| Protein GI | 158314162 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.389066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.980038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCT CCGCGGAGTC CCGACGTGAC CGGCAGCGTC GGGAGCTCGT CACGGAGATC
ACCGCCGTCG CCCGCCGCCA GCTCGACGAG GGCGGCCCGG GCAACGTGTC GTGGCGGGGC
GTCGCCCGCG AGGTCGGCAT GAACCCGGCC TCGCTCTACA CCTACTTCGG CAGCCTCGAC
GACCTGTTCA CCGCGCTGAT CACGGCGAGC TTCCAGAGTC TCGCCGACGC TGTTCGCCAG
GCGTTCGACG ACAGCGCGGG CGCCGAGCCC GTCGACCGGC TCCTCGCCTG CGTCCGGGCA
TACCGGGCCT GGGCCGTCGC CAACCCCCGG CGGTTCAACC TGATCTGGAC CGACCAGCTG
CCCGGATACG CGGCACCGCC GGACGGACCC ACCGGGACCG CCGAACAGAC GGTCTATCGG
CCGTTCCTGC TAGCGGTCGG GGAGGCGGAG GGATGCGGCG ACCGGCTGGT GGAGTTCGCC
ACGCTGCCCA CCGACGACCA GCACCGCCTG TTGGGCCTGT TCGGCACCCT GCATGGCCTG
GTGTCGCTCG AGATCAACAG CCACCTCGCG CCGTCGATGG TCGACGGGGA GGCGCTCCTC
GTCGACCGGA TGACACACGC CCTGCGACAC GTTCACCCGC CCCGGGCCAG GTCCCATGTC
GACACGGCGG AGAAATGA
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| Protein sequence | MSTSAESRRD RQRRELVTEI TAVARRQLDE GGPGNVSWRG VAREVGMNPA SLYTYFGSLD
DLFTALITAS FQSLADAVRQ AFDDSAGAEP VDRLLACVRA YRAWAVANPR RFNLIWTDQL
PGYAAPPDGP TGTAEQTVYR PFLLAVGEAE GCGDRLVEFA TLPTDDQHRL LGLFGTLHGL
VSLEINSHLA PSMVDGEALL VDRMTHALRH VHPPRARSHV DTAEK
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