| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2295 |
|---|
| Symbol | |
|---|
| ID | 5670694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2745612 |
|---|
| End bp | 2746163 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 641241215 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001506636 |
|---|
| Protein GI | 158314128 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.11399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.695488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAACG GCCCGCGGCT GTGCCTGCGG CCGCTGACCG TCGAGGCGCT GGGAGCGCTG
CTCGGCGGCG ACCGCGCGGG CGCGCAGCGG GCCACCGGGG CGGTCTTCCC CGACCCGCTG
GCGGCTCCCC CGCTGGAGGA GGGCGCCCTC GACCGGATGC GCGACCGCCT GGCGGCCAAC
CCGGCCGAAC TGGGCTGGTG GGCCTGGCTC GCCGTCGACC GCGCCAGCGG GGCCGTGGTC
GGGTCGCCGG CGCTGTCCGG CCCGCCCGAC GCGGACGGCA CCGTCGAGCT CGGCTACGCC
ACCTACCCCG AGTTCGCCGG GCGCGGGTAC GCGGTCGAGG GCGGGCGGCT GCTGCTCGAC
TGGGCGTTCG AGGACCCGCG GGTCCGGCGG GTGCTCGCCG TCGTCCCGCC GGCGCACGAC
GCGTCGGTCA GCGTCGCGCG CCGGTTGGGC CTGTCTGTGA TCGGCCGGGC GCACGACGAG
GAGGCCGGCG AGCTGCTGCT GCTGGAACGC GCGCGGGCGG ACCCGCCCAC CGGCCCGTCC
GCCCGCCGCT GA
|
|---|
| Protein sequence | MLNGPRLCLR PLTVEALGAL LGGDRAGAQR ATGAVFPDPL AAPPLEEGAL DRMRDRLAAN
PAELGWWAWL AVDRASGAVV GSPALSGPPD ADGTVELGYA TYPEFAGRGY AVEGGRLLLD
WAFEDPRVRR VLAVVPPAHD ASVSVARRLG LSVIGRAHDE EAGELLLLER ARADPPTGPS
ARR
|
|---|
| |