| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2293 |
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| Symbol | |
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| ID | 5670692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2741410 |
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| End bp | 2743191 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641241213 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001506634 |
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| Protein GI | 158314126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00195658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.572162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGGC TGAGCGGGGA GCTGAGGTTC GACGGCCGTG AGGCGGACGT CGCCGCGGTG
GGGCGGATGA CCGCCGCAAT GGAGGCGCGG GGCCCGGACG GGGTCGGCCT GTGGGCCACC
GGCCCGGTGG CGTTCGGCCA CCGTCGGCTG AAGATCATTG ATCTGTCGGA GCGGGGCGCC
CAGCCCATGG TCGACACCGC GCTCGGCCTC ACCGCGGTGT TCAACGGTTG CATCTACAAC
TACCAGGAGC TGCGCGACCG GCTCGTCGAC GCCGGCTACC GCTTCTTCTC CACCTCCGAC
ACCGAGGTGA TCCTCAAGGC GTACCACCAC TGGGGCCCCC GGTGCGTCGA CCACTTCGCC
GGCATGTTCG CCTTCGCCGT GTACGAGCGC GACACCGGCC GGCTCGTCCT CGTCCGCGAC
CGGCTCGGGA TCAAGCCGCT CTACGTGACG CGCGACCCGC ACCGCCTGCG GTTCGCCTCG
ACCCTGCCGG CCCTGCTCGC CGGCGGCGGG GTGTCCTCCG ACATCGACCT GGTCGCCTTC
CACCACTACC TGTCGTTCCA CTCGGTGGTC CCGCCGCCGC ACACGATCCT GACCGGCGTG
CGCAAGCTGC CGCAGGCCAC CATCCGGACC GTCGAGGCGG ACGGCACGAC CCGCGACGAG
GTCTACTGGC GGCCCGACTC CACCCGTCAG GAGGAGCACG CCTCCTGGAC GGCGGACGAC
TGGCGGGACG CGATCGGCGA GCGGCTGCGC ACCGCCGTGC GCCGGCGCAT GGTCGCCGAC
GTCCCGGTCG GGGTGCTGCT CTCCGGCGGC CTGGACTCCA GCCTCATCGT CGCGCTGCTC
GCCGAGGCCG GCCAGCGTGA CCTCGCCACG TTCAGCGTCG GCTTCGAGGC CGCCGGCGGC
GAGTCCGGCG ACGAGTTCCA CTACTCGGAC ATCATCGCCC GCCGCTTCGG CACCGACCAC
CACCAGATCC GCGTCCCCGG CGACCGGCTG CTGCCGGCGA TCGACGCGGC CGTCGCCGCG
ATGAGCGAGC CGATGGTCAG CCACGACTGC GTCGCGTTCT ACCTGCTCTC GCAGGAGGTG
GCCCGGCACG TCAAGGTCGT GCAGTCCGGC CAGGGCGCGG ACGAGGTCTT CGCCGGCTAC
TCCTGGTACC CGCCGCTGGC GACCGTCCCG CGCGGCGACG CCGTCGACGC CTACCTGCGG
GTGTTCGCCG ACCGGCCGCA CGCCGAGCTG CCGGCGATGG TCGAGTCGCA CCACCTCATC
GAGGGTGACG CCAGTCGGCA CTTCGTCGCC GAGCGGTTCG CCGAGCCCGG CGCCGAGACC
TCGGTCGACG CCGCGCTGCG CATCGACTCC ACGGTGATGC TGGTCGACGA CCCGGTGAAG
CGGGTCGACA ACATGACGAT GGCGGCCGGC CTGGAGGCCC GCACGCCCTT CCTCGACCAC
GAACTCGTCG AGCTCGCCGC CGCGTGCCCG CCCGAGCTGA AGCTCGCCTC CGGCGGCAAG
GGCGTGCTCA AGGACCTCAG CCGGCCGCTG ATGCCGGTGG ACGTCATCGA CCGGCCGAAG
GGGTACTTCC CGGTGCCGGC GATCCGCCAC CTCGGCGGCC CGTTCCTCGC CCGGGTCGCC
GACGCGCTGA CCGACCCGGT CGCCCGGGGC CGCGGGCTGT TCCGCAAGGA CTGGGTCGAC
GAGATGCTCG CCGACCCGAA CTCGAACCGT ACGACGCTCG GGGCGAACGC GCTCTGGCAG
GCCGCCCTGC TCGAGATGTG GCTGCAGACA CAGGGGGTGT GA
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| Protein sequence | MCGLSGELRF DGREADVAAV GRMTAAMEAR GPDGVGLWAT GPVAFGHRRL KIIDLSERGA
QPMVDTALGL TAVFNGCIYN YQELRDRLVD AGYRFFSTSD TEVILKAYHH WGPRCVDHFA
GMFAFAVYER DTGRLVLVRD RLGIKPLYVT RDPHRLRFAS TLPALLAGGG VSSDIDLVAF
HHYLSFHSVV PPPHTILTGV RKLPQATIRT VEADGTTRDE VYWRPDSTRQ EEHASWTADD
WRDAIGERLR TAVRRRMVAD VPVGVLLSGG LDSSLIVALL AEAGQRDLAT FSVGFEAAGG
ESGDEFHYSD IIARRFGTDH HQIRVPGDRL LPAIDAAVAA MSEPMVSHDC VAFYLLSQEV
ARHVKVVQSG QGADEVFAGY SWYPPLATVP RGDAVDAYLR VFADRPHAEL PAMVESHHLI
EGDASRHFVA ERFAEPGAET SVDAALRIDS TVMLVDDPVK RVDNMTMAAG LEARTPFLDH
ELVELAAACP PELKLASGGK GVLKDLSRPL MPVDVIDRPK GYFPVPAIRH LGGPFLARVA
DALTDPVARG RGLFRKDWVD EMLADPNSNR TTLGANALWQ AALLEMWLQT QGV
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