Gene Franean1_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2291 
Symbol 
ID5670690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2736585 
End bp2737547 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content76% 
IMG OID641241211 
ProductLysR family transcriptional regulator 
Protein accessionYP_001506632 
Protein GI158314124 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.11333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.519031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAC CTCAGCCCAC GCTCGCTCAG CTACGAGCCC TCGTGGGTGT CGCGGATCAC 
CGGCACTTCG GTCGGGCCGC GACCTCGCTG CACGTCAGCC AGCCGACGCT GTCGAGCGCC
GTCGCCGCGC TGGAGCGCAC CCTGGGTATC CAGCTCGTCG AGCGGACGAC CCGCAGCGTG
CTGCTGACGC CGGTGGGGGA GGAGATCGTC CAGCGGGCGC GCGGGGTGCT CGGGGCCGTC
GACGACATCG CCCAGCTCGC GGTGCGCGCG CGGGCGCCGC TGTCGGGCGA CATCCGGCTC
GGCGTCATCC CCACGGTGGC GCCCTACCTG CTGCCCCAGC TGCTGCCGTC GCTGAGGGCC
CGCCGGCCGG AGGCGCGGCT GCGGCTGCGC GAGGCGCAGA CGTCCGCGCT GCTGGAGGAG
CTGCGCGGCG GCTCGCTGGA CCTGGCGCTG CTCGCCCTGC CGACGGACGA GCCCGGGGTG
GCCGAGCTGC CGCTCTACGA CGAGGACTTC GTGCTCGTGA CGCCCGTCGA CCACCCGATG
GCCGGCAGCG CCGCGCTGCC GGTCTCCTCC CTGTGCGGCC GGGACCTGCT CCTCCTCGAG
GACGGCCACT GCTTCCGGGC GCAGGCCCTG GACGTCTGCC GCGAGGCCGG GGCACGCGAG
CGCAGTGCGC TGCGCGCGGC GAGCCTGTCC ACGATCGTGC AGATGGTCGC CGGCGGCCTG
GGACTGACGC TGATCCCGGC GGCGGCGGTG GGCGTCGAGG TGGGGGAGGG GCGCGGCCTG
GCGACGGCGA CCTTCCGTAA CCCGGCGCCG CGCCGGCGCA TCGGCCTCGC CTACCGGACG
ACCTCGGCCC GGGTGGCGGA CTGGACCCTG CTCGCGGCCG AGATCCGCGA GGCGCTGCCC
GGCACGGCCC TGGAGGTCAC GCCGGTGCCC GCACCCGAGC GGACACCGGC TCCCGTCGGC
TGA
 
Protein sequence
MAQPQPTLAQ LRALVGVADH RHFGRAATSL HVSQPTLSSA VAALERTLGI QLVERTTRSV 
LLTPVGEEIV QRARGVLGAV DDIAQLAVRA RAPLSGDIRL GVIPTVAPYL LPQLLPSLRA
RRPEARLRLR EAQTSALLEE LRGGSLDLAL LALPTDEPGV AELPLYDEDF VLVTPVDHPM
AGSAALPVSS LCGRDLLLLE DGHCFRAQAL DVCREAGARE RSALRAASLS TIVQMVAGGL
GLTLIPAAAV GVEVGEGRGL ATATFRNPAP RRRIGLAYRT TSARVADWTL LAAEIREALP
GTALEVTPVP APERTPAPVG