| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2284 |
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| Symbol | |
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| ID | 5670683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2728851 |
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| End bp | 2730941 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 641241204 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001506625 |
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| Protein GI | 158314117 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0428017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.596284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCTG GGGTTGCGGG GCTGGCCGCG GCGGCTTCCT CTGTCGGCAT GCTGATCGTC
ACTGCGGACG GCCGGGTGGC GTGGGTCAAC GACGCCCTCG TCGACCTCGT CACCGGGACG
CGGAACCCCG ACTCGCCGTT CGAGGCGCGG CTCGCGGTCG CCGAGGCCGG CCTGCCGCTG
ACCGGGCTGC ACCCGGCGGC CCCGCCCGCC GTCCTCGACT GGGCCGGCGC CGACGGCGAG
CCGCGCCGGC TGCGCATCAG CTGCCGCGAT ATGAGCGCCG GGCAGCCCTC GGAGCTGCTG
CTCTTCGAGA TCGTCGACCT CACCGGCGAG GCCGCCGACG CCGCGCGGGC CGCCGAGATC
GCCGCCACCG AGGCCGCCCT GGCCGCCCTG GCGGCCGGCC AGCGCCCGGC GCCCGCCGAC
TCCGGCCTCG CGGAGGATCT CCCACCCGCC GGGTCCTCCG GCCCGGCCGC CGGCGGCCGG
GACACCGACG CGGCGGGCGG CCTCGATCCC GAGGACGCCG CCTGGCTCGA CGCCGCGGCG
GCGATCGTGC TGGCCGCGGG CACCGAAGCG CCGTCCCCGG CCCAGCCCGG CGGCGGCCCC
GAAGCGGCGG ACGCCGGATA CGCCCTCGAC CACCCGGACA ACGCCCTCGA CCACGTCGCC
GACCACGGCG TCGACCACGC GGCCGGCGGC GCCGACGGTC ACGCGGCCGA CGCCGCCGCG
GCGGCCGGCG GCGCACTCCC GGCCGCCCCC GCCGTCGACC CGCTCACCGG GTTCGCCACC
CGGTACGCCA TGGCCGAGGA GCTGGACGGC CGTATCGCGG CCGCGGCAAC CGCGGCCGCC
GGCGCCGGCA CGGCGGTCGA GGCGGAGACC TCGGGCCCGG CGGGCCCACC GGGCTGCCTG
CTGCTGCTCG ACGTCGACCA CCTCGCCGAC GTCAACGACC TGCAGGGCCA CACCGCGGGC
GACGCCGTCC TGCGCGGGCT CGCCCACAGC CTGCGCGCCG AGCTGCCCGA GGCGATGCTC
GGCCGGCTCG GCGGGGATGA GTTCGCCGTC CTCCTGCCCA CCGGTGGCGG CGGCGAGGGG
CTGGCCGTCG CCGAGCGGCT GTGCGCCGCG CTCGCCACCA GGCCCGTCGC GCCCGGCGAG
CTCCCGGCCC GGGCCACGGT CAGCATCGGC GTCGTCCCGC TGGACCTGGC GGCCGGCAGC
GAGGCCGCGT TTGCCTGGGC GGATCTCGCG CTGCGGGAGG CGAAGCGGGC CGGGCGCAAC
CGGGCCCGGC TGTTCACCCG GGAGCAGTAC GACGAGGCCG CGCTGCGGGT GACGGTGACC
AGCCGGGTCG CCGCCGCGCT CGACAGCGGC CAGATGTCGC TGGACGTGCT GCCCCTCGTC
GATCTCGCCA GCCGCGAGGT GGTCGGCTTC GAGCTGCTCT CCCGGCTGCG GGACGGCGTG
TGGCCCGAGC TCGGGCCGCG GGGCTTCCTC GCGGCGGCCG AGCACACCGA CCTGGGCCTG
CACCTCGACC GGTGGGTCGT CCTCCGGGCG GTCAACGCCC TGGTCAGCGG CGTGCCGGGC
CGGCTGTACG TCAACCTGGC CGCGCGGTCC CTGCACGACC CCGCCTTCGG TGACTTCGTG
CTCTCCACCC TGCGGGACGG CCGCGTCGAC CCCTCCCGGC TGGGCCTGGA GATCTCCGAG
AGCGCGGCGG TGGCCAGCCC GGACGCGGCC CGGCGGCTTG CCGAGCAGCT CGGCGCCGCC
GGCTGCCCCG TCCTGCTGGA CGACTTCGGG ATGCAGACGG GCGCGGTCGT CGCGCTGCGC
AACCTCCCGC TGTGGGCCGT GAAGATCGAC GCGAACGTCG TCCGCAACGC CGACGCGAAC
CCGCGCGACC GCTCCCTGGT GGAGGCGGTC GTCCAGATCG CGCGGACGGC CGGCATGCTG
GTCATCGCCG AGGGGGTGGA CCGCGCGTCG CTGCCGCAGG TGCTGCTCGA CCTCGGTGTG
GGCCTGGCGC AGGGCTATCA TGTCGGCCGT CCGCGCCGCC TCACCGAGCT GCTCGGCGGC
CCGGACGGCG ACGACGTCAC GACGGTGATG AGCCTCGGCA ACCGGCGGTG A
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| Protein sequence | MIAGVAGLAA AASSVGMLIV TADGRVAWVN DALVDLVTGT RNPDSPFEAR LAVAEAGLPL
TGLHPAAPPA VLDWAGADGE PRRLRISCRD MSAGQPSELL LFEIVDLTGE AADAARAAEI
AATEAALAAL AAGQRPAPAD SGLAEDLPPA GSSGPAAGGR DTDAAGGLDP EDAAWLDAAA
AIVLAAGTEA PSPAQPGGGP EAADAGYALD HPDNALDHVA DHGVDHAAGG ADGHAADAAA
AAGGALPAAP AVDPLTGFAT RYAMAEELDG RIAAAATAAA GAGTAVEAET SGPAGPPGCL
LLLDVDHLAD VNDLQGHTAG DAVLRGLAHS LRAELPEAML GRLGGDEFAV LLPTGGGGEG
LAVAERLCAA LATRPVAPGE LPARATVSIG VVPLDLAAGS EAAFAWADLA LREAKRAGRN
RARLFTREQY DEAALRVTVT SRVAAALDSG QMSLDVLPLV DLASREVVGF ELLSRLRDGV
WPELGPRGFL AAAEHTDLGL HLDRWVVLRA VNALVSGVPG RLYVNLAARS LHDPAFGDFV
LSTLRDGRVD PSRLGLEISE SAAVASPDAA RRLAEQLGAA GCPVLLDDFG MQTGAVVALR
NLPLWAVKID ANVVRNADAN PRDRSLVEAV VQIARTAGML VIAEGVDRAS LPQVLLDLGV
GLAQGYHVGR PRRLTELLGG PDGDDVTTVM SLGNRR
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