| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2282 |
|---|
| Symbol | |
|---|
| ID | 5670681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2726183 |
|---|
| End bp | 2727367 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641241202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506623 |
|---|
| Protein GI | 158314115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.212652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAA CAAAACTGGG CGTGGTGGCC CTGGGCGCGA CGGCGGCACT GGCACTGGCG
GCCTGCTCCG GTGACTCGAC GACGGGCGAG AGTAGTTCCG GCGGTGAGCG GGCGCCGGCG
GTCGAGGCGG GTGGCGCCCT CGACCTCGCC GGGGTCTGCC CGGAGAACGT GGTGATCCAG
ACGGACTGGT TCGCCGAGTC CGAGTACGGC TTCCTCTACA ACCTGATCGG CCCGGACGCC
AAGATCGACA CCGGTGGCAA GCGCATCACC GGGTCGCTGG TCGCCCAGGG CAAGGACACG
GGTGTCAACG TCGAGGTGCG CTTCGGCGGG CCGGCCATCG GCTTCGAGCA GGTCAGCTCC
CAGCTCTACC TTGACCCGGA GATCGACCTG GGCCTGGTCT CCTCGGACGA GGCGATCCAG
AACTCCAAGG ACCAGCCGAC CACGGCCGTC TTCGCCCCGT TCGAGGTCAG CCCCATTATG
ATCATGTGGG ACAAGGTGAA GAACCCGAAC TTCCACACCC TGGTCGACAT CGGCCAGACC
GACACGAAGG TCCTGTACTA CGAGACCGAC ACCTACATGC AGTACCTGCT CGGCGCGGGC
ATCCTGCGGG CGTCCCAGGT CGACGGCAGT TACGACGGCG GCCCGTCGCG CTGGGTGACC
GAGGACGGCG CCGTCGCGCA GGGCGGGTTC GCCACCTCCG AGCCCTACAT CTACAAGAAC
GAGCTGGATG ACGGGCGCAG CTACGACGTC GACCTCCAGC TGATCAACGA CACCGGGTAC
CCGGTCTACG GTCAGGCGCT GTCGATCCGC TCCGGTGACA AGGAGACCCT CGCGCCCTGC
CTGAAGAAGC TGATCCCGAT CGTCCAGCAG TCGCAGGTCG ACTTCGTGAG CGACCCGGCC
GAGACCAACG CCCTGATCAT CAAGGCCGTG CAGGCCGACG ACGTCTCGGT GTGGAACTAC
TCGCCGGGCC TGGCCGACTT CGCCGTCACC ACGATGAAGG AGCGCGGCCT GGTTGCCAAC
GGGCCGAACG CGGCCGTCGG CGACATGGAG GAGGACCGGC TGGCCCGGAT GATCGAGATC
CTCGAGCCGA TCTTCACCGG CCAGCGCAAG GAGCTCAAGG CCGGCCTGGC ACCCGGTGAC
CTGTTCACGA ACGAGTTCAT CAACACCTCG ATCGGCCTCA AGTGA
|
|---|
| Protein sequence | MRRTKLGVVA LGATAALALA ACSGDSTTGE SSSGGERAPA VEAGGALDLA GVCPENVVIQ
TDWFAESEYG FLYNLIGPDA KIDTGGKRIT GSLVAQGKDT GVNVEVRFGG PAIGFEQVSS
QLYLDPEIDL GLVSSDEAIQ NSKDQPTTAV FAPFEVSPIM IMWDKVKNPN FHTLVDIGQT
DTKVLYYETD TYMQYLLGAG ILRASQVDGS YDGGPSRWVT EDGAVAQGGF ATSEPYIYKN
ELDDGRSYDV DLQLINDTGY PVYGQALSIR SGDKETLAPC LKKLIPIVQQ SQVDFVSDPA
ETNALIIKAV QADDVSVWNY SPGLADFAVT TMKERGLVAN GPNAAVGDME EDRLARMIEI
LEPIFTGQRK ELKAGLAPGD LFTNEFINTS IGLK
|
|---|
| |