| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2279 |
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| Symbol | |
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| ID | 5670678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2722953 |
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| End bp | 2724299 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641241199 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001506620 |
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| Protein GI | 158314112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.208973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG TGTCGCGGTC GCGCGTCCTA AGCGTTGCGA TCGCTACGGT TCTGCTGCTG
GCGACCGGCT GCTCCGAGGA TTCGAATTCC AACGGTACCG GGGTTTCCGG CGTCGTCAAG
ATCGGCCTGT TGGCTCCGCT CGGCGGAGCG AACGCGGAAG CCGGCCGGGA CGCTCAGCGC
GGCGCGGATC TCGCCGCCTC GGTCGTCAAT GCCGGCGCGG ACGCCGATCT CGCCTCGACG
GGCATCTGGG GCGCCAGCCG CGCCGCCTCG CTGTCCATCG TGACAATGGA CACAGAAAGC
GATCGGCAGC GTGCGGTTGA TGCTACAGAC CGCCTGGTCG CCGAAGAGCA CGTCGCCGGC
ATGGTCGGCG CGTTCGACGC CGAGGCGACG CTGGATGCCA GCCAACGCGC CGAACGCCTC
GGAACACCAT TCGTAAGTGG TGACGTTCCG TTGAGTGCGC TAACAGAACG TGGGCTGAAC
TGGTTCTTCC GTTCCGGCCC GGACGTGCGG AGCTTCGGTG GCGCGTTCCT TTCTCTGCTG
CGTGGCGCGG AACGGGACGG CGTCGCCCGT CGGCGGGTGG CCGTTCTTTA CGGCGACCGG
CCGGAAGGCC ACGACCTGCA GGCCATGCTC CAGGAACTGG CCGAGGAGAC CGACGTCGAG
CTGGTCGCGC AGGAGCGCTA CGCGCCGGGC GACGGGGACC TCACCGACGA GGTGGGCAGG
ATCCGCGCCG CCGCGCCCGA CATGGTGCTC TTCGGGGCGC TGCTCGGTGC CGGCCGCGCG
CTCGGCGACG CGCTGGGCGG CCTCGGCTAC GCCCCGCCCG GGATCGTCGT CTACGGGGCC
GCGGCGGAGG CGGTGCCGCT GGCCTCGATG CCCGGTCTCG ACGGGCGGGT GAGCCGGCAG
GTCGGGTGGT CGTCGCTGGT CGCGCAGGCG AACCCGCTGG CGACCCAGGT GTCGAAGCGC
TACCAGAGCG CCTACGGCGG GCCGATGACA GAGGCCGCCG CGGCCGCGTA CACGGCGGTC
ATGGTGCTGG CCCGGGCGAT CGGCGCCGCG GGCGGTCTCG AGCCGGAGCA GATCAGGTCG
GCGCTGGTGG CGACGAACGT GCCCGGCGCG GAGACGGTCA TGCCCTGGGA GGGCGTCCGC
TTCGACGTGA CGCACCAGAA CGCGCTGGCC GCGACGGTGG TCGAGCAGGC CACCGGCAGC
CGGTTCGCCG TCGTCTACCC GCGGGAGCTC GCCACGGTCG CCTTCACCTG GCCGGCGACG
GACCCCGCCG GCGCGGGCGC GACCACCGGC TCCAGCGGGG GCGCGGGAAC CGGCTCGGGC
CGCGCCGACG CCCGCAGCGA GGGATGA
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| Protein sequence | MAIVSRSRVL SVAIATVLLL ATGCSEDSNS NGTGVSGVVK IGLLAPLGGA NAEAGRDAQR
GADLAASVVN AGADADLAST GIWGASRAAS LSIVTMDTES DRQRAVDATD RLVAEEHVAG
MVGAFDAEAT LDASQRAERL GTPFVSGDVP LSALTERGLN WFFRSGPDVR SFGGAFLSLL
RGAERDGVAR RRVAVLYGDR PEGHDLQAML QELAEETDVE LVAQERYAPG DGDLTDEVGR
IRAAAPDMVL FGALLGAGRA LGDALGGLGY APPGIVVYGA AAEAVPLASM PGLDGRVSRQ
VGWSSLVAQA NPLATQVSKR YQSAYGGPMT EAAAAAYTAV MVLARAIGAA GGLEPEQIRS
ALVATNVPGA ETVMPWEGVR FDVTHQNALA ATVVEQATGS RFAVVYPREL ATVAFTWPAT
DPAGAGATTG SSGGAGTGSG RADARSEG
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