| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2256 |
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| Symbol | |
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| ID | 5670655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2695649 |
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| End bp | 2696824 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241176 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_001506597 |
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| Protein GI | 158314089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.020335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGCG GCACCGTGCG CGTGATCCAC ATCGTGAGCC TGATCGCCGC CGCCGGTACG
GTGGCGGCGA TGGTCACCGT CCTGCTCGGG CGCGACAGGC CGTCACGCGA GGCCCTCGGC
GTCCGGGGCG CAGACATCTC GTTCACGCTC CAGGAGGAGG CCGCTGGGAC CAGCCTCTCC
GATGGCGGGC GACGCCTCCC CGTCGAGCGG ATCCTCGCGG CGCACGGCGC GAACTACGTC
CGGCTGCGGG TCTGGGTCGA TCCGCCCGCC GGATACAGCG ACGAGCAGTC TGTCCTCACC
CTGGCACGCC GCGCGACGGA CGCGGGGCTC AGAATCATGC TTAATCCGCA CTATTCCGAC
TTCTGGGCCG ACCCGCATTC CCAGGAGATC CCGGCGGCGT GGCGTGGCGC CGATCTCGTG
ACGACGGCAG CGAAGGTCCG GGAATACACA CGCGGTCTGG TCGCCAAACT GGCGGCGCAG
GGAACGCCCG TCGACATGGT TCAGATCGGC AACGAAATCA CCAACGGGAT GCTCTGGCCG
CTCGGCGATG TTCGGGACGG CACGCGAACA CAGTGGTCAC GCCTCGCGGA ACTGGTCAAC
AGCGCGATCG AGGGTGCCCG CGAAGGCGCC TCGGGCCGGC CCGTGGACAT CGTCCTCCAC
GTCGACAGCG GGGGCGACCT CGGCCGCTCA GAGTATTTCT TCGGCAACCT CATGCAGGCG
GGCGTCACCG CGTTCGACGT CATCGGGGTG AGTTACTACC CGTACTGGAA CGGCTCGCTG
GCGACGCTGC GGGCGACGCT CGACGGCCTG GCACGGCAGT ACCACCGGGA CATCCTCATC
GTGGAGACCG CGTATCCGTG GACGTTGGGT GATCCCGGGC CGGGCGACTG GGTCACGTCC
CCCGACCAGC TACCGGACGC CGTGACAGTG CCCGCGACGC CGGCCGGGCA GGCAGCCTTC
TTCGCCGAGT TGCGGCAGAT CCTCCACGAC GTGCCGGACG GTCGAGGCCT GGGGTTCCTC
GCCTGGGAGC CCGGCTGGCT CACAGTGGCC CCGAAACCCG GCGAGCCGAT CCCCGGAGCG
AACCTCGCGA TGTTCGACCG GGACGGAGTC GGGCTGCCCA GCCTCGCCGC GTTCGCACCC
CCCGACGCCG CCGGCTCGGC GCTGGCGGGT CGATGA
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| Protein sequence | MRGGTVRVIH IVSLIAAAGT VAAMVTVLLG RDRPSREALG VRGADISFTL QEEAAGTSLS
DGGRRLPVER ILAAHGANYV RLRVWVDPPA GYSDEQSVLT LARRATDAGL RIMLNPHYSD
FWADPHSQEI PAAWRGADLV TTAAKVREYT RGLVAKLAAQ GTPVDMVQIG NEITNGMLWP
LGDVRDGTRT QWSRLAELVN SAIEGAREGA SGRPVDIVLH VDSGGDLGRS EYFFGNLMQA
GVTAFDVIGV SYYPYWNGSL ATLRATLDGL ARQYHRDILI VETAYPWTLG DPGPGDWVTS
PDQLPDAVTV PATPAGQAAF FAELRQILHD VPDGRGLGFL AWEPGWLTVA PKPGEPIPGA
NLAMFDRDGV GLPSLAAFAP PDAAGSALAG R
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