Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2255 |
Symbol | |
ID | 5670654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2694845 |
End bp | 2695315 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641241175 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001506596 |
Protein GI | 158314088 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.018064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAGC GGCACACGGA TGTGACCGTG GAACGGCCTC CGTCAGCGCG GCCTCCGTCG TCGCAGCCGT CGCCGGCCGA GACCTGCGGC GAGCTCGCCC CGCCGATCGT CGAGGCCTGC CCGATCATGG AGGTCCTCGA CCAGGTCAGC GGCAAGTGGA GCATCGGAAT CCTGGTCGCG GCCGCCCACG GGCCGGTTCG CTTCACCGAG CTGGAACGCA CCGTCAACGG CATCAGCCGG CGGATGCTGA CCCTCACCCT GCGTCGGCTC GAACGCGACG GCCTGCTCGT CCGGAAGGTC TACCCGACCG TCCCGCCGAA GGTGGAGTAC ACGGCGACGA GCGCCGCCCG CGAGCTGTTC GGCCCGCTGA CCGCGCTCAC CGAATGGGCG GAACGCCACC GGACGACCAT CGCCCGGGCC CGCCACGCCT ACGACCTGGA GAATGCCGAG AAAAAGTCCC CCGCGGGCTG A
|
Protein sequence | MSQRHTDVTV ERPPSARPPS SQPSPAETCG ELAPPIVEAC PIMEVLDQVS GKWSIGILVA AAHGPVRFTE LERTVNGISR RMLTLTLRRL ERDGLLVRKV YPTVPPKVEY TATSAARELF GPLTALTEWA ERHRTTIARA RHAYDLENAE KKSPAG
|
| |