Gene Franean1_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2255 
Symbol 
ID5670654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2694845 
End bp2695315 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID641241175 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001506596 
Protein GI158314088 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.018064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC GGCACACGGA TGTGACCGTG GAACGGCCTC CGTCAGCGCG GCCTCCGTCG 
TCGCAGCCGT CGCCGGCCGA GACCTGCGGC GAGCTCGCCC CGCCGATCGT CGAGGCCTGC
CCGATCATGG AGGTCCTCGA CCAGGTCAGC GGCAAGTGGA GCATCGGAAT CCTGGTCGCG
GCCGCCCACG GGCCGGTTCG CTTCACCGAG CTGGAACGCA CCGTCAACGG CATCAGCCGG
CGGATGCTGA CCCTCACCCT GCGTCGGCTC GAACGCGACG GCCTGCTCGT CCGGAAGGTC
TACCCGACCG TCCCGCCGAA GGTGGAGTAC ACGGCGACGA GCGCCGCCCG CGAGCTGTTC
GGCCCGCTGA CCGCGCTCAC CGAATGGGCG GAACGCCACC GGACGACCAT CGCCCGGGCC
CGCCACGCCT ACGACCTGGA GAATGCCGAG AAAAAGTCCC CCGCGGGCTG A
 
Protein sequence
MSQRHTDVTV ERPPSARPPS SQPSPAETCG ELAPPIVEAC PIMEVLDQVS GKWSIGILVA 
AAHGPVRFTE LERTVNGISR RMLTLTLRRL ERDGLLVRKV YPTVPPKVEY TATSAARELF
GPLTALTEWA ERHRTTIARA RHAYDLENAE KKSPAG