| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2252 |
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| Symbol | |
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| ID | 5670651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2691316 |
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| End bp | 2692905 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641241172 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001506593 |
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| Protein GI | 158314085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.208479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0232648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCG AAGCTGGCGA AGTCGGCCGA CTGACCCTCA CCGGCCGCCA GGGACGCTGG
GTCGTCGCGG CGGCGGTGCT GGGCTCCGCA CTGGCGTCGA TCGACGCGAC CGTCGTCGGC
ATCGCCCTGC CGGCGCTCGG GCGCGCGTTC GACGCCGACC TTGCCGCCCT GCAGTGGGTG
GTCAACGGCT ACGCGCTGGC GCTCGCCGGA CTGCTGCTCG TCGGCGGCTC GCTCGGCGAC
CGCTACGGGC GGCGGCGGGT CTTCGTGGTC GGCGTGGTCT GGTTCGCGCT GATGTCCCTG
GTGTGTGGGC TGGCACCGAA CGTGGAGATC CTCGTCGCCG CCCGGGCGCT GCAGGGCGTC
GGCGCGGCCC TGCTCACCCC GGCCAGCCTG GCGATCCTGC AGGCGTCGTT CGACGAGGCC
GACCGCGGCC GGGCGATCGG CGCGTGGACG GGGCTCGGCG GGGTGGCCAC GGCCGCCGGA
CCCTTCCTCG GCGGCTGGCT CATCGAGGCG TTCTCCTGGC GGCTGATCTT CCTGATCAAC
CTGCCGCTGG CCGCGGTCGT GGTCGCGGTC GCGGTGCGCC ACGTCCCCGA GAGCCACAAC
CCTGACGTCC GCGGGCGGCC CGACCTGCTC GGCGGCGCCC TGGTGACCGC CGGTCTGGTC
GGCGTCGTGT TCGCGCTCAT CGACGGCCCG GCCAGCGGCT GGACGTCCGC CCCGGTGCTG
GTCGGGCTGG TCGGCGGGGT CGCGCTGCTG GCCGGGTTCG TCGCCCGCGA ACACCGGGCG
GCCGACCCGG TGGTCCCGCT GGAGATGTTC GCCTCCCGGC AGTTCACGGC CGCGAACGCC
GTCACCTTCC TGCAGTACGC GGCGCTGGGC GGGGCGCTGT TCCTGCTGCC GATTCAGCTC
CAGCAGGTCA GCGGCTTCAG CCCGCTCGCC GCCGGGACGG CGCTGCTGCC TGTCACCGTG
ATGATGCTGC TGTTCTCCGC GCGGGCCGGC GCGCTGGCCA CCCGGATCGG GCCGCGGCTG
CCGATGACGG TCGGCCCCGT CGTCGCCGGC GCCGGCCTGC TGCTGGTCAC CCGGGCCGGC
CCGGACGCCT TCTACCTCAC GGACGTCCTG CCCGGTGCCG TCGTGCTGGG CCTCGGGCTC
GCCACCTGCG TGGCCCCGTT GACGTCCACC ACGCTCGCCG CGGTGCCGGC GCATCATGCC
GGGGCGGCGT CGGCGGTGAA CAATGACGTC GCGCGCACCG GCGGCCTGGT CGCCGTCGCC
GTGCTGCCCG CCCTCGCCGG GCTGGGTGGC ACCGCCTACC TCGACCCGGC CCTGTTCGAC
CGCGGGTTCC GCCGGGCGAT GGTCATCTCG GCGCTGGTGT GCGCGGCCGG CGGTCTGCTC
GCCGCGCTCG GTATCCGCAA CCCGCGCCGG CCGGCCGCCG AGCTGCCGGC CGCCGAGCGG
GCCTCCGCGC GGATCGGGCG GCAGGCGGGG GAGCGGGTCT GCTGCCCACT GGACGCACCC
GGCCTGCGTG CCACACCGGG CCCGCGGGGC ACCCCGGGCC CGGGTGCCAC CTCGGGCCCG
CCCGCCGTCC CGGGCGGGCC CGCCGGCTGA
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| Protein sequence | MAVEAGEVGR LTLTGRQGRW VVAAAVLGSA LASIDATVVG IALPALGRAF DADLAALQWV
VNGYALALAG LLLVGGSLGD RYGRRRVFVV GVVWFALMSL VCGLAPNVEI LVAARALQGV
GAALLTPASL AILQASFDEA DRGRAIGAWT GLGGVATAAG PFLGGWLIEA FSWRLIFLIN
LPLAAVVVAV AVRHVPESHN PDVRGRPDLL GGALVTAGLV GVVFALIDGP ASGWTSAPVL
VGLVGGVALL AGFVAREHRA ADPVVPLEMF ASRQFTAANA VTFLQYAALG GALFLLPIQL
QQVSGFSPLA AGTALLPVTV MMLLFSARAG ALATRIGPRL PMTVGPVVAG AGLLLVTRAG
PDAFYLTDVL PGAVVLGLGL ATCVAPLTST TLAAVPAHHA GAASAVNNDV ARTGGLVAVA
VLPALAGLGG TAYLDPALFD RGFRRAMVIS ALVCAAGGLL AALGIRNPRR PAAELPAAER
ASARIGRQAG ERVCCPLDAP GLRATPGPRG TPGPGATSGP PAVPGGPAG
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