| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2248 |
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| Symbol | |
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| ID | 5670647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2686711 |
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| End bp | 2687541 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641241168 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001506589 |
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| Protein GI | 158314081 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00352886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00701181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAACCATC TTCTGCGTGG GCATGCGCCC CTGAGCGAGG AAGCCTGGAA GGCCGTCGAC
GAGGAGGCCC GTTCCCGCCT CACGACCAAC CTCGCCGCCC GCAAGCTCAT CGACTTCGCC
GGACCGCACG GGTGGGCGTA CTCGGCCACG CCGATCGGCC GGGTGACGGC GCTGCAGGCG
CCGCCGGGCG AGGGCGTGCG TGCCCGGCTG CGCCGGGTCC TGCCCGTGAT GGAGCTGCGG
GCGGCGTTCT CCATCGACCG CGGCGAGCTG GACGCGATCG ACCGCGGCGC GGACGACATC
GACCTGTCGG CGCTGGAGGA GGCGGCCCGC CGGGTCGCCA CGACCGAGAA CTCCGTCGTC
TTCCACGGCT ACGCCGAGGC GGGGATCATC GGCATCACCG AGGCGTCGTC CCACCCGGTG
CTTGAGCTGG GGGCCGACAC CGACAGCTAC CCGCGCACGG TCGCCAAGGC GGTCGCCCTG
CTGCGCCGGG CGGGTATCGG TGGGCCGTAC GGGCTGGCCA TCGACCCGGA CGGCTACACC
GCGATCCTGG AGGCCACCGA GCACGGCGGC TATCTGCTGC TCAACCATCT CAAGCAGATC
CTCGACGGCC CTGTGGTGCG GGCTCCGGGG GTGCGCGGCG CGGTGGTGCT GAGCCAGCGG
GGCGGTGACT TCATCCTCGA GTCGGGCCAG GACCTCTCTG TCGGCTACTC CTCGCACACC
GCCGAGGAGG TCGAGCTGTA CCTGGAGCAG AGCTTCAGCT TCCGGGTCAC CGAGCCCGAC
GCGGCGGTCG CGCTGGTGTC CAGCACGGAC CGTCCGGCCA GCCAGGCCTG A
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| Protein sequence | MNHLLRGHAP LSEEAWKAVD EEARSRLTTN LAARKLIDFA GPHGWAYSAT PIGRVTALQA
PPGEGVRARL RRVLPVMELR AAFSIDRGEL DAIDRGADDI DLSALEEAAR RVATTENSVV
FHGYAEAGII GITEASSHPV LELGADTDSY PRTVAKAVAL LRRAGIGGPY GLAIDPDGYT
AILEATEHGG YLLLNHLKQI LDGPVVRAPG VRGAVVLSQR GGDFILESGQ DLSVGYSSHT
AEEVELYLEQ SFSFRVTEPD AAVALVSSTD RPASQA
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