Gene Franean1_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2247 
Symbol 
ID5670646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2686313 
End bp2686714 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID641241167 
Producthypothetical protein 
Protein accessionYP_001506588 
Protein GI158314080 
COG category[S] Function unknown 
COG ID[COG3461] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0172498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00677011 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGCGACT CAAGTATGGG GCTACACGAG CCGGCGGACG CGCTCACGCC CGGCATCGTC 
GATCGCCACC GGGCGATCGC GTCGCTGATG GAAGAGCTGG AGGCGGTCGA CTGGTACGAC
CAACGGGTGC AGGCGGCCAC GGATCCGGAA CTGGCTGCGG TGCTGGCGCA CAACCGGGAC
GAGGAGAAGG AACACGCGGC GATGACGCTG GAGTGGCTGC GTCGCCGCGA CCCCGTCCTC
GATTCGCAGC TGCGCACGTA TCTGTTCACC TCGGTCCCGG TCACGGAGGT CGAGGAAGAG
GCGATGAGCG ACGAGGGACC CGACGGCGAC GCGGCCGCGC GCGCCACGGA GCCGGCGGAC
GGCTCGCTGG GAATCGGTGG CCTGAAAGGT GTGAGCGAGT GA
 
Protein sequence
MGDSSMGLHE PADALTPGIV DRHRAIASLM EELEAVDWYD QRVQAATDPE LAAVLAHNRD 
EEKEHAAMTL EWLRRRDPVL DSQLRTYLFT SVPVTEVEEE AMSDEGPDGD AAARATEPAD
GSLGIGGLKG VSE