Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2247 |
Symbol | |
ID | 5670646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2686313 |
End bp | 2686714 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641241167 |
Product | hypothetical protein |
Protein accession | YP_001506588 |
Protein GI | 158314080 |
COG category | [S] Function unknown |
COG ID | [COG3461] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0172498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00677011 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGCGACT CAAGTATGGG GCTACACGAG CCGGCGGACG CGCTCACGCC CGGCATCGTC GATCGCCACC GGGCGATCGC GTCGCTGATG GAAGAGCTGG AGGCGGTCGA CTGGTACGAC CAACGGGTGC AGGCGGCCAC GGATCCGGAA CTGGCTGCGG TGCTGGCGCA CAACCGGGAC GAGGAGAAGG AACACGCGGC GATGACGCTG GAGTGGCTGC GTCGCCGCGA CCCCGTCCTC GATTCGCAGC TGCGCACGTA TCTGTTCACC TCGGTCCCGG TCACGGAGGT CGAGGAAGAG GCGATGAGCG ACGAGGGACC CGACGGCGAC GCGGCCGCGC GCGCCACGGA GCCGGCGGAC GGCTCGCTGG GAATCGGTGG CCTGAAAGGT GTGAGCGAGT GA
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Protein sequence | MGDSSMGLHE PADALTPGIV DRHRAIASLM EELEAVDWYD QRVQAATDPE LAAVLAHNRD EEKEHAAMTL EWLRRRDPVL DSQLRTYLFT SVPVTEVEEE AMSDEGPDGD AAARATEPAD GSLGIGGLKG VSE
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