Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2240 |
Symbol | |
ID | 5670639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2677353 |
End bp | 2677856 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241160 |
Product | hypothetical protein |
Protein accession | YP_001506581 |
Protein GI | 158314073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0381986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0061856 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGGTGGC GGCGGGCCGA GCCCGTGCTG ATCACCTCGG CGGAGGAGGC CCGGCCGGCG GAGATCCGGC GCCGGGAGCA GCGCTACATC CTGACGATGC TGGTCCGGGT GGTCTGCTTC GTGCTGGCCG TCGTTGTGTT CACCGGGTGG CTGCGGCTCG TCGCCGTGGG CCTCGCCGTC ATCCTTCCGT GGATCGCGGT CGTCATCGCC AACGGCGGCC CGGCGCGCTC GGACCGCCGG CAGGCCGGCT TCGCCCCGAA GACCACCGCG GGCGACGAGC CCCGTACCCT CGCCGCGGGC GGCCACCGGA TCGTCGACGC CGACGTGCTG GACGGTGACC TCGTCGACGG CGGCTTCCAG GACGGCAAGG CCGACGCCGA GGCCGCCGAC GGCGAGGTCG TGGACGGCGA GGTCGTGGAC GGCGAGGTCG TGGACGGTCG GGTTGTCGAC GGCCGGATCG TCGACGGCCG GATCGTCGAC GGTGAGGCCC GGCCGGGCCG CTAG
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Protein sequence | MRWRRAEPVL ITSAEEARPA EIRRREQRYI LTMLVRVVCF VLAVVVFTGW LRLVAVGLAV ILPWIAVVIA NGGPARSDRR QAGFAPKTTA GDEPRTLAAG GHRIVDADVL DGDLVDGGFQ DGKADAEAAD GEVVDGEVVD GEVVDGRVVD GRIVDGRIVD GEARPGR
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