Gene Franean1_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2227 
Symbol 
ID5670626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2663756 
End bp2664487 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content73% 
IMG OID641241147 
Producthypothetical protein 
Protein accessionYP_001506568 
Protein GI158314060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0361833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.006058 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGAGCC GCACCGCGAC GTTGAGCACC GCCGTGCGAA CCGACGAGGT CGACCCGATC 
ACGGAAGGAA CCGGTGGCTG GGCCGATCCA CTCGACCGGG CGTTCAACAG GCAGGTAGCC
GGCCTGGTGC GGCTGGGGTA CCCCGAGCTG GCGGGGATGT CTCCGGCCGA CTTCGAGGCG
CTCTGCGAGC CGCTGCGGAC GGTCACCCAC GCCGCCGTGC CCGGCCCGTT CCGGCCCGCG
ACCCGGTCGT GGATGCCCTT CGTCCTGGTC GTGTCGGGGG AGCTCGTCCG GGCGGAGGAG
ATCGTGCCGC TGCTCACGCT CGCCGGGCGC GCCGACACCG GGACCGTCGA CCGCAACCAC
GGCGAGGAGG GCCTCGCGCC CTACCGGCCG CTGCCGGAGC TGAACGTGCC CCACGCGGGT
GTGTACCTGC TCACCGACGT CGAGCGCGGG GAGGAGTTCC GTGGCATCCG GCCCGCGGAC
GCGCTGCCAC CGATCCTCGA GCGCGGGCGC TCACCGCTGA CGATCCACGA GGGGATCGCG
GTGGTCACCC ACTTCCCCGA GGCGCTGGAG AAGAACAACT GCTTCATGCT GTCCGGATCA
CGCCGGGGCG ACCGCCGCGT GCCGGCGATG TGGATTTCGA GCCGGGCACC GAAGCTGGGC
TGGTGCTGGG AGGGCAACCC GCACACCTGG CTGGGCACCG CCTCCGCCGC CACCCGCCAC
GCCGCCCGCT GA
 
Protein sequence
MASRTATLST AVRTDEVDPI TEGTGGWADP LDRAFNRQVA GLVRLGYPEL AGMSPADFEA 
LCEPLRTVTH AAVPGPFRPA TRSWMPFVLV VSGELVRAEE IVPLLTLAGR ADTGTVDRNH
GEEGLAPYRP LPELNVPHAG VYLLTDVERG EEFRGIRPAD ALPPILERGR SPLTIHEGIA
VVTHFPEALE KNNCFMLSGS RRGDRRVPAM WISSRAPKLG WCWEGNPHTW LGTASAATRH
AAR