Gene Franean1_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2226 
Symbol 
ID5670625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2662749 
End bp2663522 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID641241146 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_001506567 
Protein GI158314059 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.313635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00565512 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGGAC TTCTCGAAGG CAAGCGCGTT CTCGTCACCG GTGTCCTGAC CGAGGCGTCC 
ATCGCGTTCA GTGTTGCCCG CATCGCCCAG GAGCAGGGTG CTTCCGTGGT GCTCACCGGG
TTTGGCCGCG GCCTGTCCCT CACCCGCCGG ATCGCGCGCC GCCTGCCCAC CGAGCCGCCG
GTCGTCGAGC TCGACGTGAC TGACGAGGAG CATCTCGCCG AGCTCTCCGC GAAGGTCCTC
GAGCACGTCG ACGGCCTCGA CGGGGTGATG CACGCGATCG GGTTCGCGCC GGAATCGGTG
CTGGGCGGCA AGCCGTTCGT CGAGGCGGCC TGGTCGGAGG TCGGTACCGC GCTTCAGGTC
TCCACCTGGT CGCTCGCGTC CCTGACCCGC GCGACCATGC CGCTGTTCGG CGAGCGCGCC
AGCATCGTCG GCCTGGACTT CGACGCCTCG GTCGCCTGGC CGTCCTACGA CTGGATGGGG
GTCGCCAAGG CGGGGCTCGC CTCCGCCGCC CGCTACCTGG CCCGGGACCT CGGCCCCAGC
GGAGTGCGGG TGAATCTGGT CGCCGCCGGC CCGCTGCGCA CGATGGCGGC CAAGAGCATC
CCCGGGTTCA GCAAGTTCGA GGAGGTCTGG GGCACCCGGG CACCGCTCGG CTGGGACATC
GCGGACACCA CGCCCGCGGC GCGCGCCTGC GTCGCCCTCC TCTCGGACTG GTTCCCCGCG
ACGACGGGCG AGATCGTGCA CGTCGACGGC GGCTTCCACG CGGTCGGCGC CTGA
 
Protein sequence
MSGLLEGKRV LVTGVLTEAS IAFSVARIAQ EQGASVVLTG FGRGLSLTRR IARRLPTEPP 
VVELDVTDEE HLAELSAKVL EHVDGLDGVM HAIGFAPESV LGGKPFVEAA WSEVGTALQV
STWSLASLTR ATMPLFGERA SIVGLDFDAS VAWPSYDWMG VAKAGLASAA RYLARDLGPS
GVRVNLVAAG PLRTMAAKSI PGFSKFEEVW GTRAPLGWDI ADTTPAARAC VALLSDWFPA
TTGEIVHVDG GFHAVGA