| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2220 |
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| Symbol | |
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| ID | 5670619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2655941 |
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| End bp | 2657224 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641241140 |
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| Product | hydroxyglutarate oxidase |
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| Protein accession | YP_001506561 |
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| Protein GI | 158314053 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.531505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0413594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGAGC GGATCGCGGT CATCGGCGGC GGGATCCTCG GGCTCGCGGT GGCACGCAGG
CTCGGGCAGG TCGTGCCCGG ATCGACGGTC ACCGTGTTCG AGAAGGAGCA TGACGTCGCC
CAGCACCAGA CGGGGCGCAA CAGCGGCGTC GTCCACGCGG GCCTCTACTA CAAGCCGGGC
TCGCTGAAGG CGACGCTGTG CCGCCGCGGC GTCGGCCTGC TGCGCGAGTA CTGCGAGGCC
CGCGGCATCC GCTACGAGGA GTGCGGCAAG GTCGTCGTGG CCGTCGACGA CAGCGAGCTG
GGCCGGCTCG ACGACATCGC GCAGCGGGCG ACGGCCAACG GCGTGCCCGA CACCCGCATG
CTTGACGCCA CCGAGCTGCG CACGATCGAG CCGCACGCCC GCGGGGTCGC CGCGCTGCAC
TCCCCGACCA CGGCGATCGT GGACTACCCG GCCGTCGCCC GGGCGCTGCG CGCGGACATC
CTGGACGCGG GCGGCGCGGT GCGCACCGGC GCCGAGGTGA TCGGCGTGGA CGACGGCCCG
GCGGGCGTCC GGCTGCGGCT GCGGGTACGC GGCTCCGCGC CGGTCGCGCC GAACGGGAAC
CACCACACGG CGGCGGTCGA CGGCGGGACG GTCCGGGTGG TGTCGGAGTC GGTCGGCCCG
TTCGACCGGC TGATCTCCTG CGCCGGCCTG CACTCCGACG AGGTCGCCGC GCTCACCGGA
GAGGACAGCT CGCCGCGGAT CATCCCGTTC CGCGGCGACT ACTGGCTGCT GCGCCCCGAG
CGGCGCAACC TCGTCCGTGG CCTGATCTAC CCGGTGCCCG ACCCGCGCTA CCCGTTCCTG
GGCATCCACC TCACCAAGCG GGTGGACGGG GAGATCCTCG TCGGCCCCAA CGCCGTGCTC
GCCACCGCCC GCGAGGGCTA CACGGTGGGC ACCGTCGACC GGGGTGACCT GCGGCAGACC
CTGTCCTGGC CGGGCTTCCA GAAGATGGCT AAGACGCACT GGCGCACCGG CGCCAAGGAG
ATACTGCGCA CCGCCAGCAG GCGCGCGTTC GTCGCCGAGG CCCGACGCTA CGTTCCCGAG
CTGCGCACCG CGGACGTCGT GCGGGGCCCG GCGGGAGTGC GGGCCCAGGC CGTCGCGCGG
GACGGCAGCC TGGTCGACGA CTTCGTCCTC GCCGTGCGCG GACGGGTCGT CCACGTGCGC
AACGCCCCGT CCCCGGGTGC GACCGCGTCG CTGGCGATCG CGGAGCACAT CGTCGCCGAC
GCGGTACCCG AACGCACGTC CTGA
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| Protein sequence | MAERIAVIGG GILGLAVARR LGQVVPGSTV TVFEKEHDVA QHQTGRNSGV VHAGLYYKPG
SLKATLCRRG VGLLREYCEA RGIRYEECGK VVVAVDDSEL GRLDDIAQRA TANGVPDTRM
LDATELRTIE PHARGVAALH SPTTAIVDYP AVARALRADI LDAGGAVRTG AEVIGVDDGP
AGVRLRLRVR GSAPVAPNGN HHTAAVDGGT VRVVSESVGP FDRLISCAGL HSDEVAALTG
EDSSPRIIPF RGDYWLLRPE RRNLVRGLIY PVPDPRYPFL GIHLTKRVDG EILVGPNAVL
ATAREGYTVG TVDRGDLRQT LSWPGFQKMA KTHWRTGAKE ILRTASRRAF VAEARRYVPE
LRTADVVRGP AGVRAQAVAR DGSLVDDFVL AVRGRVVHVR NAPSPGATAS LAIAEHIVAD
AVPERTS
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