Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2209 |
Symbol | |
ID | 5670608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2641921 |
End bp | 2643984 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641241129 |
Product | ABC transporter related |
Protein accession | YP_001506550 |
Protein GI | 158314042 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.472222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAACTG CGGTCGACAA CTGGTCCACG ATGCGCTCGT TCCAACGAGA CCGCTCGGTG ACACGGGCCA GCCTGCGCCC GGGGACCGTC CGCCGCATCG TCGGCTTCGC CCGCCCCTAC CGCCGGCTGC TCGCTGGTTT CGGCGTCCTC ATCGTGCTCG GCGCGGCGAC CGGCGCCGTC ACCCCGCTGC TCTTCAAGGC GATCATCGAC GATGGGATCG TGCCCGGCCG GGCCGGGGTC GTCCAGACGC TCGCCGGGGT GGTCGCGGCT CTCGCCGTCG GCGAGGCGCT GCTCGGGCTG AGTCAGCGCT GGTTCAGCGC CCGCATCGGC GAGGGCCTGA TCTACGAGAT GCGCTCGCAG GTGTTCGACC ACGTGCAGCG CCAGCCAATC GCCTTCTTCA CCCGCACCCA GACCGGCGCG CTCATCACCC GGCTGAACAA CGACGTCCTC GGCGCGCAGT CCGCGTTCAC GAACACGCTG TCCGCCGTGC TGTCCAACAT CCTGTCGGTC GCCTTCGTCC TGATCGCGAT GATCAGCCTG TCCTGGCAGA TCACCGTGGT CGCGCTCGTG CTGCTGCCCG TGTTCGTCGT GCCGGCGCGC CTGCTCGCGC CCCGGCTGGC GGCGCTGACG CGGGAGAGCT ACGGCCTCAA CGCCGAGATG AACACGATGA TGACCGAGCG GTTCAACGTC GCCGGGGCGA TGCTCACCAA GCTCTACGGC GAGCCCGACC GTGAGGTGCG TACCTTCCGC CGCCGCGCCG GGCGGGTCCG TGACATCGGC GTGACCCAGG CGATGTACGG GCGGATCTTC TTCGTGTCCC TCACGCTGGT CGCCTCGCTG GCGACGGCGA TCGTCTACGG CGTCGGCGGT ACCTTCGCGG CCCGGGGCAG CCTCGAGGTC GGCACGATCG TCGCGCTCAC CGCCTACCTC ACCCGGCTCT ACGGCCCGCT GACGCAGCTG TCCAACGTGC ACGTGGACGT GATGACCGCG CTGGTCTCGT TCGAGCGGGT CTTCGAGGTT CTCGACCTGC GGCCGGCGAT CGAGGACGCG CCGGACGCCG TCGAGCTGCC GGCGGGGCCG GTGGCCGTCG AGTTCGACCA TGTCGGATTC CGCTATCCGG CGGCGACCGA GGTGTCACTG GCCTCGCTGG AGTCCACGGC CGTGCTCGAC AGCAGGACGC CGGAGCCGGT GCTGCACGAC GTCACCTTCC AGGTGGGCCC CGGTGAGCTC GTGGCGCTCG TCGGCCCGTC CGGCGCGGGG AAGACCACCA TCAGCCAACT CGTCGGACGG ATGTACGACG CCCGGGACGG CGCGGTCCGG ATCGGGGGGC TCGACGTCCG TGCGGTCAGC GGCCGCTCGC TGCGCGCGGC CGTCGGCGTG GTCACCCAGG ACGCGCACCT GTTCCACGAC ACGATTCGGG CCAACCTGCT GTTCGCCCGG TCCGACGCGA CGGAGGAGCG CATGTGGGCG GCGCTGGACG CGGCCCACAT CGGCCGGGCG GTGCGCGACC TGCCCGACGG GCTGGACACG GTCGTCGGGG ACCGTGGATA CCGGCTCTCG GGCGGTGAGA AGCAGCGGCT GGCCATCGCC CGGCTGCTGC TCAAGGAGCC CGCTGTGGTT GTCCTGGACG AGGCCACCGC CCACCTGGAC AGCGAGTCGG AGGCCGCGGT GCAGCGGGCG CTGACCGCGG CGCTGGCCGG GCGCACGTCG CTGGTGATCG CCCACCGGCT CTCGACCGTC CGGCGGGCCG ACCGCATCCT CGTGGTCGAC GGTGGGCGGA TCGCCGAGAG CGGCACCCAT GACGAGCTGA TGGCCCTCGG CGGCCTCTAC GCCGAGCTTC ACCACACCCA GTTCGCTACG CAGGACGACG CCGGGACCGG CGGGCGGCCG GGTTCGCGGG CCGCCGCCGA TGCCGCCGAT GCTGCCGTCG TGGGAGAGGT GGGCGAGGCG GGTACCCCGG CTGCCGCGGG GGTGACCGGG CCGCCGGCCG ACTGGAGCTC CGGTGCCCGC GTCACCCTCG ACCCGCCGAA CGGCGGGGTG GCGGCCCTGC CGGCCGCGCG CTGA
|
Protein sequence | MRTAVDNWST MRSFQRDRSV TRASLRPGTV RRIVGFARPY RRLLAGFGVL IVLGAATGAV TPLLFKAIID DGIVPGRAGV VQTLAGVVAA LAVGEALLGL SQRWFSARIG EGLIYEMRSQ VFDHVQRQPI AFFTRTQTGA LITRLNNDVL GAQSAFTNTL SAVLSNILSV AFVLIAMISL SWQITVVALV LLPVFVVPAR LLAPRLAALT RESYGLNAEM NTMMTERFNV AGAMLTKLYG EPDREVRTFR RRAGRVRDIG VTQAMYGRIF FVSLTLVASL ATAIVYGVGG TFAARGSLEV GTIVALTAYL TRLYGPLTQL SNVHVDVMTA LVSFERVFEV LDLRPAIEDA PDAVELPAGP VAVEFDHVGF RYPAATEVSL ASLESTAVLD SRTPEPVLHD VTFQVGPGEL VALVGPSGAG KTTISQLVGR MYDARDGAVR IGGLDVRAVS GRSLRAAVGV VTQDAHLFHD TIRANLLFAR SDATEERMWA ALDAAHIGRA VRDLPDGLDT VVGDRGYRLS GGEKQRLAIA RLLLKEPAVV VLDEATAHLD SESEAAVQRA LTAALAGRTS LVIAHRLSTV RRADRILVVD GGRIAESGTH DELMALGGLY AELHHTQFAT QDDAGTGGRP GSRAAADAAD AAVVGEVGEA GTPAAAGVTG PPADWSSGAR VTLDPPNGGV AALPAAR
|
| |