Gene Franean1_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2209 
Symbol 
ID5670608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2641921 
End bp2643984 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content72% 
IMG OID641241129 
ProductABC transporter related 
Protein accessionYP_001506550 
Protein GI158314042 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.472222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACTG CGGTCGACAA CTGGTCCACG ATGCGCTCGT TCCAACGAGA CCGCTCGGTG 
ACACGGGCCA GCCTGCGCCC GGGGACCGTC CGCCGCATCG TCGGCTTCGC CCGCCCCTAC
CGCCGGCTGC TCGCTGGTTT CGGCGTCCTC ATCGTGCTCG GCGCGGCGAC CGGCGCCGTC
ACCCCGCTGC TCTTCAAGGC GATCATCGAC GATGGGATCG TGCCCGGCCG GGCCGGGGTC
GTCCAGACGC TCGCCGGGGT GGTCGCGGCT CTCGCCGTCG GCGAGGCGCT GCTCGGGCTG
AGTCAGCGCT GGTTCAGCGC CCGCATCGGC GAGGGCCTGA TCTACGAGAT GCGCTCGCAG
GTGTTCGACC ACGTGCAGCG CCAGCCAATC GCCTTCTTCA CCCGCACCCA GACCGGCGCG
CTCATCACCC GGCTGAACAA CGACGTCCTC GGCGCGCAGT CCGCGTTCAC GAACACGCTG
TCCGCCGTGC TGTCCAACAT CCTGTCGGTC GCCTTCGTCC TGATCGCGAT GATCAGCCTG
TCCTGGCAGA TCACCGTGGT CGCGCTCGTG CTGCTGCCCG TGTTCGTCGT GCCGGCGCGC
CTGCTCGCGC CCCGGCTGGC GGCGCTGACG CGGGAGAGCT ACGGCCTCAA CGCCGAGATG
AACACGATGA TGACCGAGCG GTTCAACGTC GCCGGGGCGA TGCTCACCAA GCTCTACGGC
GAGCCCGACC GTGAGGTGCG TACCTTCCGC CGCCGCGCCG GGCGGGTCCG TGACATCGGC
GTGACCCAGG CGATGTACGG GCGGATCTTC TTCGTGTCCC TCACGCTGGT CGCCTCGCTG
GCGACGGCGA TCGTCTACGG CGTCGGCGGT ACCTTCGCGG CCCGGGGCAG CCTCGAGGTC
GGCACGATCG TCGCGCTCAC CGCCTACCTC ACCCGGCTCT ACGGCCCGCT GACGCAGCTG
TCCAACGTGC ACGTGGACGT GATGACCGCG CTGGTCTCGT TCGAGCGGGT CTTCGAGGTT
CTCGACCTGC GGCCGGCGAT CGAGGACGCG CCGGACGCCG TCGAGCTGCC GGCGGGGCCG
GTGGCCGTCG AGTTCGACCA TGTCGGATTC CGCTATCCGG CGGCGACCGA GGTGTCACTG
GCCTCGCTGG AGTCCACGGC CGTGCTCGAC AGCAGGACGC CGGAGCCGGT GCTGCACGAC
GTCACCTTCC AGGTGGGCCC CGGTGAGCTC GTGGCGCTCG TCGGCCCGTC CGGCGCGGGG
AAGACCACCA TCAGCCAACT CGTCGGACGG ATGTACGACG CCCGGGACGG CGCGGTCCGG
ATCGGGGGGC TCGACGTCCG TGCGGTCAGC GGCCGCTCGC TGCGCGCGGC CGTCGGCGTG
GTCACCCAGG ACGCGCACCT GTTCCACGAC ACGATTCGGG CCAACCTGCT GTTCGCCCGG
TCCGACGCGA CGGAGGAGCG CATGTGGGCG GCGCTGGACG CGGCCCACAT CGGCCGGGCG
GTGCGCGACC TGCCCGACGG GCTGGACACG GTCGTCGGGG ACCGTGGATA CCGGCTCTCG
GGCGGTGAGA AGCAGCGGCT GGCCATCGCC CGGCTGCTGC TCAAGGAGCC CGCTGTGGTT
GTCCTGGACG AGGCCACCGC CCACCTGGAC AGCGAGTCGG AGGCCGCGGT GCAGCGGGCG
CTGACCGCGG CGCTGGCCGG GCGCACGTCG CTGGTGATCG CCCACCGGCT CTCGACCGTC
CGGCGGGCCG ACCGCATCCT CGTGGTCGAC GGTGGGCGGA TCGCCGAGAG CGGCACCCAT
GACGAGCTGA TGGCCCTCGG CGGCCTCTAC GCCGAGCTTC ACCACACCCA GTTCGCTACG
CAGGACGACG CCGGGACCGG CGGGCGGCCG GGTTCGCGGG CCGCCGCCGA TGCCGCCGAT
GCTGCCGTCG TGGGAGAGGT GGGCGAGGCG GGTACCCCGG CTGCCGCGGG GGTGACCGGG
CCGCCGGCCG ACTGGAGCTC CGGTGCCCGC GTCACCCTCG ACCCGCCGAA CGGCGGGGTG
GCGGCCCTGC CGGCCGCGCG CTGA
 
Protein sequence
MRTAVDNWST MRSFQRDRSV TRASLRPGTV RRIVGFARPY RRLLAGFGVL IVLGAATGAV 
TPLLFKAIID DGIVPGRAGV VQTLAGVVAA LAVGEALLGL SQRWFSARIG EGLIYEMRSQ
VFDHVQRQPI AFFTRTQTGA LITRLNNDVL GAQSAFTNTL SAVLSNILSV AFVLIAMISL
SWQITVVALV LLPVFVVPAR LLAPRLAALT RESYGLNAEM NTMMTERFNV AGAMLTKLYG
EPDREVRTFR RRAGRVRDIG VTQAMYGRIF FVSLTLVASL ATAIVYGVGG TFAARGSLEV
GTIVALTAYL TRLYGPLTQL SNVHVDVMTA LVSFERVFEV LDLRPAIEDA PDAVELPAGP
VAVEFDHVGF RYPAATEVSL ASLESTAVLD SRTPEPVLHD VTFQVGPGEL VALVGPSGAG
KTTISQLVGR MYDARDGAVR IGGLDVRAVS GRSLRAAVGV VTQDAHLFHD TIRANLLFAR
SDATEERMWA ALDAAHIGRA VRDLPDGLDT VVGDRGYRLS GGEKQRLAIA RLLLKEPAVV
VLDEATAHLD SESEAAVQRA LTAALAGRTS LVIAHRLSTV RRADRILVVD GGRIAESGTH
DELMALGGLY AELHHTQFAT QDDAGTGGRP GSRAAADAAD AAVVGEVGEA GTPAAAGVTG
PPADWSSGAR VTLDPPNGGV AALPAAR