Gene Franean1_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2208 
Symbol 
ID5670607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2641029 
End bp2641865 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content75% 
IMG OID641241128 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001506549 
Protein GI158314041 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.692598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.388652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC CGGCCGCCGC CGACCCGGCG GCGGCCGGGC TGGGCGTACT CGCAGCTGGC 
CCTTGCGTCT CGCTCACTGT GAGTGAAGAT GTGTCGGGTT GGGTGGGCGA CACGCCCACC
CTCCCGTCCA TCGCCGCGGC GATGGACGGC ATCCTGCGCG ACCTGCGCGG CGACGTCCGT
GTCGTCGTCG TGAACGCCGT ACACCGTCTG TCGGCTCCGG TCGACCACAA GGTCGACCAC
AAGACCAGCC ACGAAATCGA ACACAGAGCC GATCACGAGG TCGGCCACCA GACCGGCCCG
ACGGCCGGCC CATCCGCCGG CGGGGTCGCG GCCGGGCGGA ACCTCGCCAC GTGGTCCCGG
GTCGCGCGCC GGCTGTCCGA GCGGCCGGAC CTGCTCAGCA TCGCTGTCTC CGCCGGGCCG
ACGACGGGCC CGGGGCTGGC ACTGGCCCTC GCCTGCGACC TGCGGGTACT GACCGAGGAC
GCATCCCTGT GCCTCACCGA GGCCACGGCC GGTCGCGTGC CGGGCCTGGG CGTTGCGGGT
ACCCTCGTCG ACACCGTCGG CTACGCCCGC GCGCTTGCGC TCTGTCTGAC CGGCAGGCCG
GTGGGCGCGC GGGACGCGCT CCGGCTCGGC CTCGCCGCGC TCGTCGTCCC CCGCCGGGAC
CTCGACGCCG AGGTCGGCCG CTTGGTGGAC CGCCTGCTCG CGGTGCCGCC CGACGTCAGC
GCGGAGACGA AGGCGCTGCT CGCCGGCGCC CGCGAGCGGT CGGGCATCCA GCGCCGCGCG
GCGGAGGACG ACGCCCTCGC GCGGGTCCTC GCCACGACCG CCGGGAATGC GGGCTAG
 
Protein sequence
MSMPAAADPA AAGLGVLAAG PCVSLTVSED VSGWVGDTPT LPSIAAAMDG ILRDLRGDVR 
VVVVNAVHRL SAPVDHKVDH KTSHEIEHRA DHEVGHQTGP TAGPSAGGVA AGRNLATWSR
VARRLSERPD LLSIAVSAGP TTGPGLALAL ACDLRVLTED ASLCLTEATA GRVPGLGVAG
TLVDTVGYAR ALALCLTGRP VGARDALRLG LAALVVPRRD LDAEVGRLVD RLLAVPPDVS
AETKALLAGA RERSGIQRRA AEDDALARVL ATTAGNAG