Gene Franean1_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2201 
Symbol 
ID5670600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2633338 
End bp2634351 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content76% 
IMG OID641241121 
Producthypothetical protein 
Protein accessionYP_001506542 
Protein GI158314034 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.229787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA GGTATACCCA GACTCTGAGC GCCGACGATC TCGCCGCGGC GATGTCCGCG 
GCGGACGAGA CGGGCGGCCG GGTGACGGAG AGCTACAACG TCGCCCCGAC CACGGTGATG
CCGATCGTCG TCGCGCGTCG GCCGCCGGGC GACGCCGGGC ACGGTGAGCC GGCGGCTGGC
GTTGTCACCG GCGGGGCCGG CGAAAGTGGC GAGGCTGGTG AGACAGGCGC GGGCGGCGGG
CCGCGGGCCG CGGGCGGTGG GCGGGTCCTG CGGCTGGCCA CCTGGGGTCT GGTCCCGTTC
TGGGCGAAGG ACCCGGCGAT CGGTAGCCGC CTGATCAACG CCCGCGCCGA GTCGGTCGCG
TCCAAGCCGG CGTTTCGCGC AGCGTTCGCC GCCCGCCGGT GCCTCGTTCC CGCCACCGGT
TTCTACGAGT GGCGGCGGCC CGGCGGCTCG CGCCGCGGCC AGCCCTACTA CATCCATCCG
GCCGGCCACC CGGGGGCCGA CGGCCTGTTC GCCTTCGCCG GGCTCTACGA GGTCTGGTCG
AAGGGCGAGC AGCCGCTGAC CACGTTCACG ATCCTCACCA CCGACGCGGC CGCGGGCATC
GAGTTCATCC ACGACCGGTC ACCCGTCGTG GTGCCGCGCC CGGCCTGGTC CCGGTGGATC
GACCCGACGC TGCGGGATCC CGAGGCGCTC GCCGGGATCC TGCGGCCCGC GCCGGCCGGG
GTGTTCGCCG CACACCCGGT CTCACCCGAG GTCGGCAGCG TCCGCAACAC CGGCCGTCAC
CTCGTCGACC CCGTCGACGT CGACCCGGAG GAGGCAGCCG CCGCTGCCGG TCCGCCGGCC
ACCGCCGGCC CGTCCCGGGC CCGGCGGGCC GGGCGAGCGA CGCCCGTAGC CAAGTCAGCG
TCCGTCGCCG GGCCGACCTC CGCCGCCGAG CCGCCGCCCG GTGTGGGGGT AATCGCCCCA
CATGAGGTCG GCCTCTTCGG CGAGGATGGC GTGGGTCCGC ACGCGCGGCG ATGA
 
Protein sequence
MCGRYTQTLS ADDLAAAMSA ADETGGRVTE SYNVAPTTVM PIVVARRPPG DAGHGEPAAG 
VVTGGAGESG EAGETGAGGG PRAAGGGRVL RLATWGLVPF WAKDPAIGSR LINARAESVA
SKPAFRAAFA ARRCLVPATG FYEWRRPGGS RRGQPYYIHP AGHPGADGLF AFAGLYEVWS
KGEQPLTTFT ILTTDAAAGI EFIHDRSPVV VPRPAWSRWI DPTLRDPEAL AGILRPAPAG
VFAAHPVSPE VGSVRNTGRH LVDPVDVDPE EAAAAAGPPA TAGPSRARRA GRATPVAKSA
SVAGPTSAAE PPPGVGVIAP HEVGLFGEDG VGPHARR