Gene Franean1_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2198 
Symbol 
ID5670598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2631535 
End bp2632290 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content75% 
IMG OID641241119 
Productputative integral membrane protein 
Protein accessionYP_001506540 
Protein GI158314032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGT ACCGTCCGTC CGCCGGCGAC GATCCACCGG CGACGAGGAG AGGGGCAGCC 
ACGTCCGATC TGCTGAGCCG GAGCCTCGAC GCGCAGCCGG CCCCCGCGCA CTGGATCCTC
GTCCTCACGG GGGTCGTCGC GCTGCTCACT GTGGCGAGCG GCCGCACCTG GCCGACCGCC
CGTCACGTCG TGACGATCGC GCACGAGGGC GGGCATGCCC TCGCCGCGGT CGCCACCGGC
CGCCGCCTGG CCGGGGTGCG CCTGCACTCC GACACCTCCG GCGTCACGGT GTCCTCGGGC
CGGCCGACCG GGCCCGGGGT CATCCTGACC GTCGCCGCCG GCTACACGAC GCCGTCGCTG
CTCGGGCTGG GTGCCTCCGG CCTGCTCGCC ACCGGGCGGA TCAGCCTGCT CCTGCAGATC
CTCGTCGCGC TGCTGCTGGT CATGCTGGTG GTTGTCCGCA ACGCCTTCGG TGTCGTGTCG
GTGCTGGTCA GCACCGTCGT CGTGCTCGGG ATCTCGTGGT TCGCGGCGGA CGACGTCCAG
GCTGGCTTCG CCGCCTACGC GACCTGGTTC CTGCTGCTCG GGGCGGTGCG GCCGATCATC
GAGGTCCAGC GGCAGCGGCG GCAGCGGCGC GCCCGGGACT CCGACCCGGA CCAGCTCGCC
CGCCTCACCG GACTGCCGGG TGCCTTCTGG GTCGGCGCGT TCGGACTGCT CTCGCTGGGC
TGCCTGGCGA CCGCGGCGGC CGCGCTCGTC GTCTGA
 
Protein sequence
MAAYRPSAGD DPPATRRGAA TSDLLSRSLD AQPAPAHWIL VLTGVVALLT VASGRTWPTA 
RHVVTIAHEG GHALAAVATG RRLAGVRLHS DTSGVTVSSG RPTGPGVILT VAAGYTTPSL
LGLGASGLLA TGRISLLLQI LVALLLVMLV VVRNAFGVVS VLVSTVVVLG ISWFAADDVQ
AGFAAYATWF LLLGAVRPII EVQRQRRQRR ARDSDPDQLA RLTGLPGAFW VGAFGLLSLG
CLATAAAALV V