Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2198 |
Symbol | |
ID | 5670598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2631535 |
End bp | 2632290 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241119 |
Product | putative integral membrane protein |
Protein accession | YP_001506540 |
Protein GI | 158314032 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.124755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGCGT ACCGTCCGTC CGCCGGCGAC GATCCACCGG CGACGAGGAG AGGGGCAGCC ACGTCCGATC TGCTGAGCCG GAGCCTCGAC GCGCAGCCGG CCCCCGCGCA CTGGATCCTC GTCCTCACGG GGGTCGTCGC GCTGCTCACT GTGGCGAGCG GCCGCACCTG GCCGACCGCC CGTCACGTCG TGACGATCGC GCACGAGGGC GGGCATGCCC TCGCCGCGGT CGCCACCGGC CGCCGCCTGG CCGGGGTGCG CCTGCACTCC GACACCTCCG GCGTCACGGT GTCCTCGGGC CGGCCGACCG GGCCCGGGGT CATCCTGACC GTCGCCGCCG GCTACACGAC GCCGTCGCTG CTCGGGCTGG GTGCCTCCGG CCTGCTCGCC ACCGGGCGGA TCAGCCTGCT CCTGCAGATC CTCGTCGCGC TGCTGCTGGT CATGCTGGTG GTTGTCCGCA ACGCCTTCGG TGTCGTGTCG GTGCTGGTCA GCACCGTCGT CGTGCTCGGG ATCTCGTGGT TCGCGGCGGA CGACGTCCAG GCTGGCTTCG CCGCCTACGC GACCTGGTTC CTGCTGCTCG GGGCGGTGCG GCCGATCATC GAGGTCCAGC GGCAGCGGCG GCAGCGGCGC GCCCGGGACT CCGACCCGGA CCAGCTCGCC CGCCTCACCG GACTGCCGGG TGCCTTCTGG GTCGGCGCGT TCGGACTGCT CTCGCTGGGC TGCCTGGCGA CCGCGGCGGC CGCGCTCGTC GTCTGA
|
Protein sequence | MAAYRPSAGD DPPATRRGAA TSDLLSRSLD AQPAPAHWIL VLTGVVALLT VASGRTWPTA RHVVTIAHEG GHALAAVATG RRLAGVRLHS DTSGVTVSSG RPTGPGVILT VAAGYTTPSL LGLGASGLLA TGRISLLLQI LVALLLVMLV VVRNAFGVVS VLVSTVVVLG ISWFAADDVQ AGFAAYATWF LLLGAVRPII EVQRQRRQRR ARDSDPDQLA RLTGLPGAFW VGAFGLLSLG CLATAAAALV V
|
| |