Gene Franean1_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2178 
Symbol 
ID5670578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2612271 
End bp2612564 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content71% 
IMG OID641241099 
Producthypothetical protein 
Protein accessionYP_001506520 
Protein GI158314012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.330502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACGT ACGAGCAGGT GGCCCGCTTC ATGGCGGAGT ACGCGCGGCT GACTCCCGAG 
CAGCGGCGAG CGTTCCGCCG CGCGGTCGCA CTGTTCCGTG AGGGCCTGGA GACGGGCCAG
TTTCACCCAA GCCTCGGGGT GAAGGGCTTC CGCTCCGAGC CGGGCGTGTT CGAACTGCGG
TGGGCGAAGG ACGGCCGGGC CCTGTGGGAG TACGGCGAGC CCGTTCCGGG CCGCGACGGC
CCGCATGTCC GCTGGCTGCG GATCGGCACC CACGACATCT ACAAGAGCCG GTAA
 
Protein sequence
MPTYEQVARF MAEYARLTPE QRRAFRRAVA LFREGLETGQ FHPSLGVKGF RSEPGVFELR 
WAKDGRALWE YGEPVPGRDG PHVRWLRIGT HDIYKSR