Gene Franean1_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2158 
Symbol 
ID5670558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2587512 
End bp2589275 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content68% 
IMG OID641241079 
Productheparinase II/III family protein 
Protein accessionYP_001506500 
Protein GI158313992 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA ATGCGGGTCG CTACCTGCGC ACCGTCGCGC TGCTTCGACC CGAACAGACG 
GTTGCCCGCG TCCGGTTGAG GACACAGCGA GCCGCGCCAA ATCAGTTTCC GGTGGTCTCG
GAACGAATGC TCGCGCTCGC CGCGCGGCAG TGGACACGCC CGCTTGGCGG GGCCGGGTGG
CCAGCCGAGT TTCTTCCGTT TGACGCAGGG CTGGACGACG TCTGGCCGCC GGCCGATGAG
CTCGCTGCCG GGCGTTTCAC GCTTCTGGGC CACAGTCGGG ATCTCGGCGA GCCGGCCGAC
TGGATCCAAC GCAACTCGCC TACGCTGTGG CGGTACCACC TGCATTACTG GGACTGGGCG
TGGTCTCTGG CACTGCATCC TGAGCGCCGA TGGGCGAGCG GGATCTTCCG TGCGCTATAC
CGGTCCTGGC GGGAGAGTAC CTCCCCCGGA CGGGGCGACG CCTGGGCACC CTATGTGGTC
TCGCTGCGGA TCTGGTCCTG GTGCGGACTT GTCGACCGGC TGTCCGGCGA CACCGCGACA
GCCTCCGCGA TCTGGACCGA TCTTGCCCAG CACATGGTCT TTCTGCGACT GCACTTGGAG
ACCGACGTCG GCGGCAACCA CTTGGTCAAG AACCTCAAGG CCCTGCTGGG TGCCGCCGTC
GCCTTCCACG ATCCCCAGGC CGTGGACCGC TGGACCGGGC GGCTCGTCGA CGAGGTCGAA
CGCCAGATCC TGCCTGACGG GGGCCATACC GAACGCGCGC CCGCCTACCA CTGTCAGGTA
CTCGCCGACC TCGACGACGT GGCCGGTCTG CTCGGCGCCG CGGGGCTGCA TGTACCCGAC
GAGATCATCG ATGCGCGATA CCGGATGCGG GCCTGGCTCG GCAGCGTGTT GTCACCTGAT
GGCGCTGTTC CACTTCTGAA CGACGGCTAC CCGGTTCCTA CCACTGCAGT GACCGTGCTT
TGCCCCAGTC TCCCTGGTGA GGAGCCGGAG GCGGACAGGA TCAAAGGTCC GGACGACGTT
CGGGAGCAGG GGGTCGGGCT CACGCTGCTA CCCTCATCCG GCCTGGCCGT GCTGCGCGCC
GATCGGTGGC GGGTACTGGC AGACATCGGG CTTCCCTGCC CGGACGACCT CCCGGCGCAT
GCCCATGCGG ACACGCTCTC CTTCCTCCTC TGGCACGATG GCTGGCCGCT ACTCGTCGAG
GTCGGAACAT CGACATACGC CCTTGGGGCA GTCCGGGCCG CCGAACGATC CACCTCGGCG
CACAACACCG TCGTCATCGA CGGACACGAC TCCACAGAGG TATGGGGCGC CTTCCGCGCC
GGACGCCGGG CCCGGGTCGT TCTCGGGCCG GTCCGCTGCG ATGACGCTGG CGGCAGGCTG
GACCTGACCG CATCGCACGA CGGCTACCGC TGGCTGCCTG GACGGCCCAT GCATGCCAGG
GCCTGGACGC TGGACGGCAA GGGACTTCAG ATCACCGATC GGGTCACCGG TGCCGGCGAG
CATCAGATCG AAATCCTCTT CCATCTCGCG GCCGGCTGGC GGGCCCGGCC GGGGCGTCAC
GGACTGACGA TCGAGCACCA CCGGGGAGTC GGTCCGTTCC GCCTGGTCGC GGTCGGGCCC
GGCACCTGGC ACACCCGTGA GGGCCAAGTG GCGACCGGTT GGCAGCGGAC CACGCCGGCG
ACGGTCGTTG CTTACTGTCT GAATGCACGG CTGCCGGTCG AGGTTCACAC CCAGATAGCC
GTAGGGACGG CCGACAATGA CTGA
 
Protein sequence
MIDNAGRYLR TVALLRPEQT VARVRLRTQR AAPNQFPVVS ERMLALAARQ WTRPLGGAGW 
PAEFLPFDAG LDDVWPPADE LAAGRFTLLG HSRDLGEPAD WIQRNSPTLW RYHLHYWDWA
WSLALHPERR WASGIFRALY RSWRESTSPG RGDAWAPYVV SLRIWSWCGL VDRLSGDTAT
ASAIWTDLAQ HMVFLRLHLE TDVGGNHLVK NLKALLGAAV AFHDPQAVDR WTGRLVDEVE
RQILPDGGHT ERAPAYHCQV LADLDDVAGL LGAAGLHVPD EIIDARYRMR AWLGSVLSPD
GAVPLLNDGY PVPTTAVTVL CPSLPGEEPE ADRIKGPDDV REQGVGLTLL PSSGLAVLRA
DRWRVLADIG LPCPDDLPAH AHADTLSFLL WHDGWPLLVE VGTSTYALGA VRAAERSTSA
HNTVVIDGHD STEVWGAFRA GRRARVVLGP VRCDDAGGRL DLTASHDGYR WLPGRPMHAR
AWTLDGKGLQ ITDRVTGAGE HQIEILFHLA AGWRARPGRH GLTIEHHRGV GPFRLVAVGP
GTWHTREGQV ATGWQRTTPA TVVAYCLNAR LPVEVHTQIA VGTADND