Gene Franean1_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2156 
Symbol 
ID5670556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2584590 
End bp2585969 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content65% 
IMG OID641241077 
Productcoenzyme F390 synthetase-like protein 
Protein accessionYP_001506498 
Protein GI158313990 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.295514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCT CGAGGCTGTT CCGGTCACGC ACGGCCGCCG CCGCGTTCAC CGCGGCCTGC 
CGGAGCCCTC TCGTCGAGAC ACACACACGC ACTCTCAGCC GCCTCGAGCG TGCCGAGCCA
GCTGAGATCC ACCAGTGGCA ACAACAGCGT CTGCGTCGAT TCATCGACCG CTGGGCACGA
TCGATCGACT ATTATCAGCA GCATCCGGAG TACCTTCACT GGAACTATGG CCCGCCACCC
GTTCTCACGA AGGAGGACGT CCGCCGAGCA GCGTCCTCCT TCGTTCATCC CCACGTGCCG
GCACGCCAAG TCACCACGGG CGGGACCGGA GGACGGCCAC TGGACCTGCG CGTCTCATAC
ACCTCGTTCT TTACCGAGTG GGCGCATATC GCCCACGTGT GGGGACGAGC TGGGGTCCGA
CTCACGGACC CAAAAATCAC GTTTCGTGGC GGTAGCCTGG GCGAAGGTTT CGCGGGGCGA
CCGATGGTGT TCCAGCGGAC CTACAACCAC CTGCTCGTCT CGCCTTTCCA TCTGTCGGAC
CGCATCTTCA CCGAACTCAT TGGCCAGATC CGCGAGCTAC GTCCCGTTGC AATCTGGGGG
TACCCCTCCG CGATCACTCC CTTCGCCCGC TGGGTAGCAC GCACCGGCCC GCATCCGGAG
CTGAGCCGGA TCCGTGCCGT GCTGCTGGCC AGCGAGGGGA CATTCGACTG GCAGCTCGAG
CTGTTTCGTG AGGTGTTCGG GGCGACACCC ATCCGCTGGT ACGGGCAGAG CGAGAAGGTG
GCTTTCGGTG GCGAGTGCCC TATGCTGCCC GGCCACTATC ACCTGGCTCC CACCTACGGC
GTAGTCGAGG TAGTCGACGA GCGGGTGATT GGCAGCGGGA TGACCAACGC GGCTATGCCG
CTGCTGCGGT ACGACACTGA GGACAGCGGC GTTCTCGCAC CGGCGGGGCC GGGTGTACGG
CGTTGCCGCT GCGGGTCCCC CTTTGACGTG CTACGGGAAC TCGCGGGCCG ATGGGACCAG
TCACTGGTGT ACGGCCGGGA AGACGAACCT ATCTCGTCGG CGGCACTCAA CTTCCACGAC
GAGGTATTCG CACGTTTTGA CCGGTTCCAG TTCCGTCAGG AACGCCGCGG TGAAGTTCAG
CTACGGGTGA CGACCGCAGA CAAAGCCCCG CGGGCCAGCG ATCTAGAGAA GGCTCGCCAG
GTTCTCCAGG CTCGGGTAGG CGACCGCCTG CACGTCTCGG TCGTATCAGT GCCGGGTGAC
GACCTGCTGA CCAGACGCGG GAAGACCATG GCGATTGATC AGCGCTATCA ACCGGGGAAC
GACTACCCCG CACCATCGGC GCCAAAATCG ACGGAACGGC GGACGGAGGC TTCTGCATGA
 
Protein sequence
MTGSRLFRSR TAAAAFTAAC RSPLVETHTR TLSRLERAEP AEIHQWQQQR LRRFIDRWAR 
SIDYYQQHPE YLHWNYGPPP VLTKEDVRRA ASSFVHPHVP ARQVTTGGTG GRPLDLRVSY
TSFFTEWAHI AHVWGRAGVR LTDPKITFRG GSLGEGFAGR PMVFQRTYNH LLVSPFHLSD
RIFTELIGQI RELRPVAIWG YPSAITPFAR WVARTGPHPE LSRIRAVLLA SEGTFDWQLE
LFREVFGATP IRWYGQSEKV AFGGECPMLP GHYHLAPTYG VVEVVDERVI GSGMTNAAMP
LLRYDTEDSG VLAPAGPGVR RCRCGSPFDV LRELAGRWDQ SLVYGREDEP ISSAALNFHD
EVFARFDRFQ FRQERRGEVQ LRVTTADKAP RASDLEKARQ VLQARVGDRL HVSVVSVPGD
DLLTRRGKTM AIDQRYQPGN DYPAPSAPKS TERRTEASA