Gene Franean1_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2147 
Symbol 
ID5670547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2577147 
End bp2577788 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID641241068 
Productmethyltransferase type 11 
Protein accessionYP_001506489 
Protein GI158313981 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGTC TGGCATCCGG ACTTGAGTTG ACCTCGGTCC TGGATGTTGG GAGCGGAACC 
GGCCGGGCGG CGGTCTACCT CAAGCGCCGT CACCCGCAGA TGCAGGTTAT CGGGTTGGAA
CCCGTGATCG ACCTGCTGCG TAACTCCGAC AGGAGCGTGG GTGCGAATTT TGTTTGTGGA
AGTGGAAGCA GCCTTCCATT CCCCGACGAC AGCTTTGATG CCGTCTGCGC TACGGGGCTA
CTGCATCATG TGCCCGTACC GTCCATCGTC GTTAACGAGA TGACCCGAGT CGCTAGACGT
GTAGTAATGA TTTCAGATGC GAACCGCTTC GGTCAAGGTA GGCCCGTCGC CAGGTTGGCC
AAGCTGGCGA TCTCGCGTCT TGGATTCTGG CCGATCTACA TGACAATCCG CACCGGGGGC
AAAGGATATC AGTACTCTGA GGGGGATGGA ATATTCTACT CGTACAGTAT CTATGATAGT
GCACCTACGC TCGACAAATG GGCTGACCGA ACATTCATCA TACCGACATC TACTTGCCTG
AGAGGTGGTT ACAAGCCGCT TCTGTCTGCG CCAGGGGCCC TGTTGGTTGC GATCCGCGAC
CAACCCCCGG TAGCGTCGGC CCTACCCGTC AAGATGGGAT GA
 
Protein sequence
MSGLASGLEL TSVLDVGSGT GRAAVYLKRR HPQMQVIGLE PVIDLLRNSD RSVGANFVCG 
SGSSLPFPDD SFDAVCATGL LHHVPVPSIV VNEMTRVARR VVMISDANRF GQGRPVARLA
KLAISRLGFW PIYMTIRTGG KGYQYSEGDG IFYSYSIYDS APTLDKWADR TFIIPTSTCL
RGGYKPLLSA PGALLVAIRD QPPVASALPV KMG