Gene Franean1_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2145 
Symbol 
ID5670545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2575365 
End bp2576321 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID641241066 
Productinsertion element hypothetical protein 
Protein accessionYP_001506487 
Protein GI158313979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGATT CTTCTGGTCC CGCCCCGGTA TGCGGGCGGC TGACCGACCG AATCGGTATC 
GGCGTACTGA CCCGACTGGT GGACCGGGAC CTGGTCGACG AGGTGCTCGC TGATACCGGC
AAACGTGAGC AGCGAACAAG GCTGCTGCCG GCACGGGTGG TCGTCTACTA CGTGATGGCA
CTGTGTCTGT TCTTCGAGGA GAGCTACGAA GAAGTGATGC GGATCCTCGT GGACGGCCTG
CGTTCCCTGG GATCCTGGTC AAAGGACTGG CACGTTCCGA CGACCAGTGC CATCAGTAAG
GCCCGCACCC GGCTGGGACC CGAGCCCCTG CAGGTGCTGT TTGAACGCGT CGCGGTCCCC
TGCGCGCAGC GGGGCACCCG CGGGGCGTGG CTTCGAGGCC GGCGCCTGAT GGCGATCGAC
GGCTTCGTGC TCGACGTCCC CGACACCCCC GACAACGACG CGGCCTTCGG CCGCTCTGGC
GGCGAAAAAA GACCCGTCCC CTTCCCGCAG GCCCGCCTCG TCGGCCTCGG CGAATGCGGA
ACCCACACGA TCGTCGCCGC CGAACTCGAC TCCTGGCACA TCAACGAGCA CCGCCTCGCC
GAAAAACCAG TCGACAGATT CGAGCCCGGC ATGCTCGTCA TCGCCGACCG CGGCTTCTAC
AGCTTCCTCT TCTGGAAAGA CGCCGCCGCC ACCGGCGCCG ACCTGCTGTT CCGCATGCCC
GCCGGCCCCG AACTACCCGT TGTCGAAACC CTCCCCGACG GCTCCTACCT GTCCTTCCTG
CTCGACCCGA AAGTCCGGCG CAGACGAGCC GTCCAGAAAC ACTGCGGATC CACCCTCGTC
GAGCCACCCT CCGGCCCCAC CGTCCGGGTT ATCGAATACG AGGTCACCAA CCGCGACGGC
AGCGGCGTGC GGTCCCGGTC GAAAGGTATT GCGACGACAG CGTGGCGTAC TGCGTGA
 
Protein sequence
MVDSSGPAPV CGRLTDRIGI GVLTRLVDRD LVDEVLADTG KREQRTRLLP ARVVVYYVMA 
LCLFFEESYE EVMRILVDGL RSLGSWSKDW HVPTTSAISK ARTRLGPEPL QVLFERVAVP
CAQRGTRGAW LRGRRLMAID GFVLDVPDTP DNDAAFGRSG GEKRPVPFPQ ARLVGLGECG
THTIVAAELD SWHINEHRLA EKPVDRFEPG MLVIADRGFY SFLFWKDAAA TGADLLFRMP
AGPELPVVET LPDGSYLSFL LDPKVRRRRA VQKHCGSTLV EPPSGPTVRV IEYEVTNRDG
SGVRSRSKGI ATTAWRTA