| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2140 |
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| Symbol | |
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| ID | 5670540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2568165 |
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| End bp | 2570354 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641241061 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001506482 |
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| Protein GI | 158313974 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGG CCGTCCGGCG TCTCACCACG CCGGTGGCCC GACGGTGCCA GGAATCACCC
GGTTCGACCG CATACAGCGG TTCGGCAGTG CGTGGCGGCG CGGCTGCGCG CAGCAGTGCC
GTGGCGACGG CCGGCGGGGG GAAGACGGCG AGGGCGCAGG CCACGGTCGC GCACGCCGGA
GGGGAAACGT CGGATGCGCC GATGACCTCT CCTGCGATGG CGCACTCGCC GACCACCGGA
GGTTCTCCGA CGTTTCCGGA GCTGGAGGTC TCCAGCGCGG GGCGCTCGAG CGGCGGAGAC
CAGCACGGCC GGAATCGGCC CTGGGGCGGG CGGCAGCGCG CGGGCGGCCG TGTCGACGAG
ACCACGACAT CCGGTCGGCG GCCCGGCGTC CTCGCGTCTG CGTCCGTGGT TCTTCTCGTA
GGGGTCGTGT CCTGGTGGGC GGCGATCAAG GTGCTGGCCC CGTCCGGCGC GATCACCACA
TCGCTGACGG TGGCGGCGGT GGCGTGCCTG CCGCTGTCCG GACTGGGTGA CCGGATGGTC
GCGGCGGTCC GTCGCCGCTG GTACGGCTCG GACGATCTGA CTGGCCTGCC AGGTCGTCGC
CATTTCGTCG CGACCGCCTC CCGCTGGCTC GGGGGCGGTC ACCGAGCCCG GGGCTCGGTG
TCGGCGGCGC TCATCCTGAT CGATCTCGAC CGCCTCCGGG ACATCAACGG GACGCTCGGC
CACGAGCACG GTGACCACAT GCTGGCCACC GTCGGCGCCC GGCTGCGTTC CGTGCTGCGT
CCCGCCGACC TGCTCGCGCG GGTCGACGGC GACGAGTTCG CGGTACTGCT GCGGGACGTC
GACCTCGCCG GCGCCGAGGC GGTCGCCCGG CGGATCCGGG AGGCGCTGAG AATCCCTGTC
CGCCTGGATG ACCTGCGCGT CCAGGCCGAC GTCAGTGTCG GTATCGCCCA TGCTCCCGAA
CACGGGCGCG GCATCCTGGA GCTCATGCGG CGGGCGGAGG AGGCGATGTA CGCGGCCAAG
GGGACCCACA CCGGCCAGCG TGTCTACGAC CCTGCCTGCC AGCTCGGCAA CCGTGCCCAG
CTGGGGCTGC GGGCCGACCT GCGGGAGGCG CTGGACGGCG GCCAGATCGA ACTCCGCTAC
CAGCCCAAGG CCGAAATGCG CAGCGGCCGG ATCAGGGGTG TCGAGGCGCT GGTGCGATGG
CGCCATCCCA CCGGCGGGCT CCGTCCGCCG AACATGTTCC TGCCCGAGAT GGAACGCGCC
GGCCTGATGG GGCGCCTGAC CCAGCAGGTC CTCGACATCG CCCTCGCCGA CTGCGCCCGC
TGGCACGCGG CCGGCGCCGC GCTGGCCGTG TCGGTGAACG TGCCCGCCTC GGTCATCGTC
GACCGCGGAT TCGTGGACCT GGTGCGCGGT GCGCTGGAGC GCCACGGCCT GCCCGCGTCG
GCGCTGGTCG TCGAAGTCAC CGAGGACGGG CTCATCACGG TCCTGGAGCA GGCACAGCGG
ACCCTCTCCG GCCTGCGTGA CCACGGTGTG CGGGTCAGCC TCGACGACTA CGGCACAGGC
CTGTGCTCGC TCGCCTACCT GCGGGAGCTC CCCGCGGACG AGGTGAAGCT CGACCAGCGG
TTCCTGCGCG ACATCGACCG CGACTCCTCG GCGGCCGAGA TCGTCCGGTC CACGGTTTCC
CTCGCGCACG CGCTCCGGCT GCGCATCGTC GCCGAGGGCG TCGAGACGTC GCGCTCGTGG
GCGTCGCTTG CGGCCTGGCA GTGCGACGAG GTCCAGGGCT ACTTCGTCTC CCGCCCGCTG
GCGGGGGAGC GGGTGCTGAG CTGGCTGCGC GAATGGGGCG ACCGGCTCCG GTGGCTGCCC
TCCGGGGGGG AGCCTGCGCC GACGGGTCCG ATCAGGGTCA CCACCGCCTC GCGTGGCGCC
CGAGTGCACT CGGTGGCTAC CGCCGCGAAC GCCCAGCTCT CCTCGCCCGC AGCAGGAGCG
GCGTCCGCCG CGCCGGTCGC GACGGCGTCG ATGATGACTT CGGGTTCGGC GTGCGGCGCC
GCGGAGCCGC CCACGGCGGG CAAACCCTCG CTCGCCGTGC CGTCCAGTCG CCCGGGCCTG
CGGTCGATGG GATTCCGCAT GTCGCAGCAT GCTGAGGCGG GAAGCCGGCG GCCGTCCGGT
CAGCCTGCCC ATGATGGGTG GGGAGCCTGA
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| Protein sequence | MSRAVRRLTT PVARRCQESP GSTAYSGSAV RGGAAARSSA VATAGGGKTA RAQATVAHAG
GETSDAPMTS PAMAHSPTTG GSPTFPELEV SSAGRSSGGD QHGRNRPWGG RQRAGGRVDE
TTTSGRRPGV LASASVVLLV GVVSWWAAIK VLAPSGAITT SLTVAAVACL PLSGLGDRMV
AAVRRRWYGS DDLTGLPGRR HFVATASRWL GGGHRARGSV SAALILIDLD RLRDINGTLG
HEHGDHMLAT VGARLRSVLR PADLLARVDG DEFAVLLRDV DLAGAEAVAR RIREALRIPV
RLDDLRVQAD VSVGIAHAPE HGRGILELMR RAEEAMYAAK GTHTGQRVYD PACQLGNRAQ
LGLRADLREA LDGGQIELRY QPKAEMRSGR IRGVEALVRW RHPTGGLRPP NMFLPEMERA
GLMGRLTQQV LDIALADCAR WHAAGAALAV SVNVPASVIV DRGFVDLVRG ALERHGLPAS
ALVVEVTEDG LITVLEQAQR TLSGLRDHGV RVSLDDYGTG LCSLAYLREL PADEVKLDQR
FLRDIDRDSS AAEIVRSTVS LAHALRLRIV AEGVETSRSW ASLAAWQCDE VQGYFVSRPL
AGERVLSWLR EWGDRLRWLP SGGEPAPTGP IRVTTASRGA RVHSVATAAN AQLSSPAAGA
ASAAPVATAS MMTSGSACGA AEPPTAGKPS LAVPSSRPGL RSMGFRMSQH AEAGSRRPSG
QPAHDGWGA
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