Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2134 |
Symbol | |
ID | 5670534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2563626 |
End bp | 2564411 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641241055 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_001506476 |
Protein GI | 158313968 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCC CGGACGGATT CATGGACGCG CCGACGTCGG TGGCGTTCGG CGCGGTCGCG ATCGCGGGCG TCGGTTACGC CGTGAAGCGC GCAGGCGAGG AGAGCTCGGA CCAGGTGGTG CCGCTCGCCG GACTGTGCTC CGCCTTCGTC TTCGCGGCCC AGATGCTCAA CTTCCCCGTC GCCATGGGGA CCAGCGGCCA TCTGCTCGGT GGTGCGCTTG CGGCCGTTCT GGTCGGGCCG TGGCTGGGCG CGATCGCCCT GGCCGTGGTG CTCGGCGTCC AGTCGCTGTT CGCCGACGGA GGCCTGACGG CGCTCGGACT CAACATCACG AACATGGCGG TGGTGGGCGC GCTCGGCGGC TATGCCATCT TCTGGCTGGT GCGACGACTC CTTCCGCCGC AAGCGTCGTC GGTGGTGGCC GCGTCCGCGG TGGCCGCGTT CCTCACCGTG CCACTCGCCG CGGGAGCGTT CGTGATCGAG TTTGCCATCG GCGGGACGGT CGACCTGCCG CTGAGCGGCG TGGCTGGCGC AATGCTCGGA GTTCACCTGC TGATCGGGAT CGGCGAAGCC GTGATCACCG CGGCGACCGT GAGCCTGGTC ATGAGTACTC GGCCCGACCT GGTGTACGGG GCGCGCGATC TGCGCGGAGC GCAGCGGCTG GCGATCCGGC GGCCGGTGCT CGCGGCGCCG AGGAGCGCCC CGGCGGCCGC GACGACCGAA ACGGCCATGA CCGAAGCCGC GGCGGCGCCC GCCGCGGGCG GCTGGGGACG AGGGGAGCGA GCGTGA
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Protein sequence | MHIPDGFMDA PTSVAFGAVA IAGVGYAVKR AGEESSDQVV PLAGLCSAFV FAAQMLNFPV AMGTSGHLLG GALAAVLVGP WLGAIALAVV LGVQSLFADG GLTALGLNIT NMAVVGALGG YAIFWLVRRL LPPQASSVVA ASAVAAFLTV PLAAGAFVIE FAIGGTVDLP LSGVAGAMLG VHLLIGIGEA VITAATVSLV MSTRPDLVYG ARDLRGAQRL AIRRPVLAAP RSAPAAATTE TAMTEAAAAP AAGGWGRGER A
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