Gene Franean1_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2130 
Symbol 
ID5670530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2559004 
End bp2560008 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content73% 
IMG OID641241051 
Productmethyltransferase type 12 
Protein accessionYP_001506472 
Protein GI158313964 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGC GGTCAGGCAG TCCGGAAGGA TCTGCGGCTC CCGGACTCTC TGACGGTAGG 
GCTTCAGCTC CCGCGCGCAT CTCGCGTGTC CGCTCCCTGG CGGTGGCAGT GACAGGGGGT
CGGACGTTTC TCGGCGCGAG GTGGGTCCGC GCGCTGCTGG CGCTGACCCC GCCCGCCCGG
CAACCAGGTC TCGCGCTGTG GCTGCTCGGG CTGGCCCCGC ACTACTTCCG GGGCCGCGAC
CGGGGCGGCG AAGCCCATCG CAACCGTGTG TCACGAGAGC TGTTCGTCCG GGATGTGCTC
GCACCGTTCC TGGCACCCGA GCAGGACCTG CTCGACATCG GCTGCGGCCC CGGGTACCTG
GCGCGGGCGG TGGCCGGGCG GGTCTGGTCC GTCACGGCGG TCGACGTCTC GCGGGGCGTC
CTGGCCTGCG CGCGGGTCCT CAACTCGGCA GTCAACATCG ATTATCGGAC TCCCCGGGAG
TTCTTCGGAT CCCGGCGTCG GGTGGACATC GCCGTGTCCC TCGCGGTCGC CGAGCACCTC
GGCGACGATG AGCTGTCGGC GATGCTGTCC TCGGTGCGGC CCACACTCCG ACCGGGCGGC
CGCCTTCTCC TTCACGTGGC CGTGGCGGAC TCCGACACCT CCGGCGAGGG CGTGCCGCCG
TCCGCCGGTC TTGCACCTGG CCTGTGGGGT CGATACGCCC TCCCGATCCA CCCGCGCACC
CGGGACCACC TCGTGGGGCT GGTCGAACGG GCCGGGTTCA GCGACGTCGA GCTCCACGCC
CTGGGCGCGC TGACCGACCT CGACGACAGG CTCACGGCCC GGCATCTGCT GGTCGCCACC
CGCCCGCACG ATCCGGTCGC ACTCCGGACC GCACTCGAGT TCGCTCAGGC CCGCCCGGAC
AGCCAGGTAG GCATGCACGT CGGGGCTGGC TTGGACGCAC GGACCGGGCC GGATGGCGTG
GCGGCGGTCC TGGTGGACCT CGAGGAACGC CGAGCGACCG CCTGA
 
Protein sequence
MTQRSGSPEG SAAPGLSDGR ASAPARISRV RSLAVAVTGG RTFLGARWVR ALLALTPPAR 
QPGLALWLLG LAPHYFRGRD RGGEAHRNRV SRELFVRDVL APFLAPEQDL LDIGCGPGYL
ARAVAGRVWS VTAVDVSRGV LACARVLNSA VNIDYRTPRE FFGSRRRVDI AVSLAVAEHL
GDDELSAMLS SVRPTLRPGG RLLLHVAVAD SDTSGEGVPP SAGLAPGLWG RYALPIHPRT
RDHLVGLVER AGFSDVELHA LGALTDLDDR LTARHLLVAT RPHDPVALRT ALEFAQARPD
SQVGMHVGAG LDARTGPDGV AAVLVDLEER RATA