Gene Franean1_2128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2128 
SymboldnaG 
ID5670528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2555851 
End bp2557725 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content71% 
IMG OID641241049 
ProductDNA primase 
Protein accessionYP_001506470 
Protein GI158313962 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAC GCATCCGCGA CGCTGACATC GCTCTCGTAC GGGAGCGCTC ACTCATCGCG 
GACGTCATCG GTGACCACGT GCAGCTCCGT CCGGTCGGCG GTGGCAGCCT GGTCGGCCTG
TGCCCGTTCC ACGACGAGAA GTCACCGTCG TTCAACGTGC GGCCCTCGGT CGGGTTCTTC
CACTGCTTTG GCTGCAACGA GGGCGGGGAC GTCTACGCCT TCATCCGCAA GATCGACGGG
TTGACCTTCC CGGAGGCCGT CGAGCGGCTC GCCCGGCGGG CCGGCATCAC GCTGACCTAC
GAGGGCGGGG GCACCACCAG CCGCGCGGTG ACGAGCCAGC GCCAGCGGCT GCTGGACGCC
CACCGGCTGG CCGCCGAGTT CTACGTCGAA CAGCTCCACT CCTCCCCGGA CGCCCGGGCC
GGCTGGGAGT TCCTGGCCTC GCGTGGCTTC GACCGGGCGG CGGCGGAACA GTTCGGTCTC
GGCTACGCGC CGTCGTCCTG GGACGCGCTG ACCAGGCACC TGCTCGCCCG CCGGTTCACC
GCCGAGGAGC TGGAGCTGGG CGGGCTGGCG AAGCGGGGCG GCCGCGGCGG CCTCATCGAC
CGGTTCCACC ACCGCCTGCT GTGGCCGATC CGTGACCTCG GCGGCGAGGT CGTCGGTTTC
GGTGGCCGGC GCCTCGCCGA GGGCCCCGAT GCCGGTCCCA AGTACCTCAA CACCGCCGAG
ACGCCGCTGT TCAAGAAGGC GAAGCTCCTC TACGGCGCCG ACCTGGCCCG CCGCGAGATC
GCGCGCCGCT ACCAGGTTGT CGTCGTCGAG GGCTACACCG ACGTCATGGC GTGCCACCTG
GCCGGGGTGC CGACGGCGGT CGCGAGCTGC GGAACCTCCT TCGGTGCCGA CCACGTCGCG
ATCGTCCGCC GGCTGCTGAT GGACTCCGAC GCCCGCACCG GCGAGGTCAT CTTCACCTTC
GACGGGGACA AGGCGGGCCA GGCCGCCGCC CTGCGGGCCT TCGAGTACGA GGACCGCTTC
GTCACCCAGA CCTTCGTCGC GGTGCAGCCG GACGGCCTCG ACCCCTGCGA CCTGTGGACG
CAGCACGGTG ACGCGGCCGT GCGAGACCTG GTGGCCAGCC GCCAGCCGCT GTTCGAGTTC
GCCATCCGCG GCGTGATCGA CCGCTACGAC CTCAACACCA CCGAGGGCCG CATCGCCGCG
CTGGACGCGG CAGCCCCGCT GGTGAACCGG CTCAAGGACG CAGGCATGCG GCACCGGTAC
GCGGTGAACC TCGACCGCTG GCTCGGCTTC CTCGACGAGC GGTTCGTGGT CGAGCGGGTG
GGGCAGCACC GGTCGCAGGC CGGGGCGGCC GAGGGCGTCG GCGCGCGCCG GCGGCTGGAC
CCGGCGCCGG ACGATGCGAC CGCCATCGTC GAACGGGAGA CCCTCAAACT CGCCCTGCAA
CATCCGGGGC TGGCCGGACC GATGTTCGAC ACGCTGTCCA CGGAGCTGTT CACTGTTCCC
GCGCACCGGG CCGTCCGGGA GGCGATCGCC GTGGCGGGCG GGGTGTGCGC GGGTCTGTAC
GCGGCCGGTG ACCCGTCCGG CTGGGTTGCG GCGGTGGTGG ACGCGACGCC GGACGAGGAG
CTCCGGCGGT TCGTCCTCGC GCTCGCTGTC GAGGGGGTGC TGTGCGACCA CGATGTGGAC
GACCGCTACG TCGACGATCA GATGTCGCGT GTGCAGGAGC TGCATGTGAC CCGTCGGATC
CGGGAGCTCA AGTCGCGGGT GCAGCGACTG AACCCGGCAT CCGACACCGA TGCCTTCAAC
CGTGCGTTCG GTGAGCTGAT TGCTTTGGAA CAGCACAAGC TCCAACTCCG GGAGCGGGGC
GTAGGTGCCG CGTAA
 
Protein sequence
MAGRIRDADI ALVRERSLIA DVIGDHVQLR PVGGGSLVGL CPFHDEKSPS FNVRPSVGFF 
HCFGCNEGGD VYAFIRKIDG LTFPEAVERL ARRAGITLTY EGGGTTSRAV TSQRQRLLDA
HRLAAEFYVE QLHSSPDARA GWEFLASRGF DRAAAEQFGL GYAPSSWDAL TRHLLARRFT
AEELELGGLA KRGGRGGLID RFHHRLLWPI RDLGGEVVGF GGRRLAEGPD AGPKYLNTAE
TPLFKKAKLL YGADLARREI ARRYQVVVVE GYTDVMACHL AGVPTAVASC GTSFGADHVA
IVRRLLMDSD ARTGEVIFTF DGDKAGQAAA LRAFEYEDRF VTQTFVAVQP DGLDPCDLWT
QHGDAAVRDL VASRQPLFEF AIRGVIDRYD LNTTEGRIAA LDAAAPLVNR LKDAGMRHRY
AVNLDRWLGF LDERFVVERV GQHRSQAGAA EGVGARRRLD PAPDDATAIV ERETLKLALQ
HPGLAGPMFD TLSTELFTVP AHRAVREAIA VAGGVCAGLY AAGDPSGWVA AVVDATPDEE
LRRFVLALAV EGVLCDHDVD DRYVDDQMSR VQELHVTRRI RELKSRVQRL NPASDTDAFN
RAFGELIALE QHKLQLRERG VGAA