Gene Franean1_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2110 
Symbol 
ID5670510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2536561 
End bp2537703 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content73% 
IMG OID641241031 
Productchaperone protein DnaJ 
Protein accessionYP_001506452 
Protein GI158313944 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGG ATTATTACGC GACGCTCGGT GTGCGGCGTG ACGCCACCGG TGACGAGATC 
AAGCGGGCCT ACCGCAAGCT GGCCCGGGAG CTGCATCCGG ACGTCAATCC GGACCCGGAG
GCGCAGCAGC GGTTCAGGAA CGTGACGAAC GCCTACGAGG TCCTCTCGGA CCCCGAGAAG
CGGCAGATCG TCGACCTCGG TGGTGACCCG CTCGCGCCCG GTGGTGGCGC GGCCGGCGCC
GGTTCGCCGT TCGGCGCCGG TTTCGGCGGC CTCGGCGACA TCATGGACGC CTTCTTCGGC
GGTGGTGCCA GCCGCGGCCC GCGCTCGAGG GTGCGCCGTG GGAACGACGC GCTGCTGCGG
CTCGAGCTCG ACCTGGCCGA GACCGCGTTC GGTGCCACCC GGGACATCAC CGTCGACACG
GCCGTGGTGT GCGCGACCTG TACCGGCGCG GGCGCCGCGC CCGGCACGCA GCCGTCGACC
TGCTCGACCT GCCACGGCCG CGGCGAGGTC CAGCAGGTGA CCCGCTCGTT CCTCGGCCAG
ATGGTGACCT CACGGCCCTG CCCGCGCTGC TCCGGCACCG GAACGGTCAT CGAGCATCCC
TGCCGGGACT GCTCCGGTGA CGGCCGCGTC CGCAAGCGCC GGACCCTGAC GGTGAAGATT
CCCTCGGGCG TCGAGGACGG CATGCGCATC CGGCTGTCCG GCGAGGGCGA GGTCGGCCCC
GGCGGCGGGC CGCCCGGCGA CCTGTACGTC GAGGTCTCCG AGCGTCAGCA CGCGGTCTTC
AGCCGGGAGG GCGACGACCT CCACTGCGAC CTTCGCCTGC CGATGACCGC CGCGGCCCTG
GGCACGATGG CGACGCTGGA GACCCTCGAC GGCTCCGAGA CGATCACGGT GAAGCCGGGC
ACCCAGCCCG GCGAGGTGCT CAGGCTCGCC GGGCGCGGTG TTCCGCACCT GCGCGCGGTG
GGGCGCGGGC ACCTGCACAT CCACATCGTC GTCGAGACGC CGACGAAGCT CGACGCCGAG
CAGGAACGCC TCCTACGGGA GCTGGCGAAG CTGCGTGAGG AGGAGACGCC GGCGGTGGTC
GGCGGATCCT CCAGCGGGTC CGGCCTGTTC TCCCGGCGCC GTGGCGGTCG GCGCAACCGC
TGA
 
Protein sequence
MAVDYYATLG VRRDATGDEI KRAYRKLARE LHPDVNPDPE AQQRFRNVTN AYEVLSDPEK 
RQIVDLGGDP LAPGGGAAGA GSPFGAGFGG LGDIMDAFFG GGASRGPRSR VRRGNDALLR
LELDLAETAF GATRDITVDT AVVCATCTGA GAAPGTQPST CSTCHGRGEV QQVTRSFLGQ
MVTSRPCPRC SGTGTVIEHP CRDCSGDGRV RKRRTLTVKI PSGVEDGMRI RLSGEGEVGP
GGGPPGDLYV EVSERQHAVF SREGDDLHCD LRLPMTAAAL GTMATLETLD GSETITVKPG
TQPGEVLRLA GRGVPHLRAV GRGHLHIHIV VETPTKLDAE QERLLRELAK LREEETPAVV
GGSSSGSGLF SRRRGGRRNR