Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2105 |
Symbol | rpsT |
ID | 5670505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2531154 |
End bp | 2531477 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641241026 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001506447 |
Protein GI | 158313939 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCCCG GCACTCTCGT ACCATCCCGA CTCGAAACTC AGAGGTTCTC CCGCGTGGCC AACATCAAGT CGCAGATCAA GCGCAACCTC ACCAACGAGA AGCGACGGCT GCGCAACAAG GCCGTGAAGT CCGAGCTGAA GACGCACGTC CGTCGCTTCC GCGACGCCGT CGAGGCCGGG GACGTCGAGC GCGCCGAGAG CGCTCTCCGC ATCGCCTCCA AGAAGCTCGA CAAGGCCGCC AGCAAGGGTG TCATCCACCC CAACCAGGCC GCCAACCGCA AGTCGGCGCT TGCCAAGGCC AACGCGGAGA TCAGCGCCTC CTGA
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Protein sequence | MPPGTLVPSR LETQRFSRVA NIKSQIKRNL TNEKRRLRNK AVKSELKTHV RRFRDAVEAG DVERAESALR IASKKLDKAA SKGVIHPNQA ANRKSALAKA NAEISAS
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