Gene Franean1_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2105 
SymbolrpsT 
ID5670505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2531154 
End bp2531477 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID641241026 
Product30S ribosomal protein S20 
Protein accessionYP_001506447 
Protein GI158313939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCCCG GCACTCTCGT ACCATCCCGA CTCGAAACTC AGAGGTTCTC CCGCGTGGCC 
AACATCAAGT CGCAGATCAA GCGCAACCTC ACCAACGAGA AGCGACGGCT GCGCAACAAG
GCCGTGAAGT CCGAGCTGAA GACGCACGTC CGTCGCTTCC GCGACGCCGT CGAGGCCGGG
GACGTCGAGC GCGCCGAGAG CGCTCTCCGC ATCGCCTCCA AGAAGCTCGA CAAGGCCGCC
AGCAAGGGTG TCATCCACCC CAACCAGGCC GCCAACCGCA AGTCGGCGCT TGCCAAGGCC
AACGCGGAGA TCAGCGCCTC CTGA
 
Protein sequence
MPPGTLVPSR LETQRFSRVA NIKSQIKRNL TNEKRRLRNK AVKSELKTHV RRFRDAVEAG 
DVERAESALR IASKKLDKAA SKGVIHPNQA ANRKSALAKA NAEISAS